Factsheet for Zm00001d020517_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042647_P001	Maize	mitochondrion	26.03	67.02
Zm00001d037913_P001	Maize	plastid	25.83	56.56
Zm00001d011716_P001	Maize	nucleus	63.64	26.83
HORVU3Hr1G067440.1	Barley	plastid	51.86	25.23
Zm00001d044668_P001	Maize	extracellular	39.05	24.97
Zm00001d043666_P001	Maize	nucleus	57.85	24.45
TraesCS3D01G248600.1	Wheat	nucleus	53.72	22.91
TraesCS3B01G277400.1	Wheat	cytosol	53.72	21.47
GSMUA_Achr1P05230_001	Banana	nucleus	35.95	15.89
CDX92449	Canola	nucleus	27.27	13.47
KRH19252	Soybean	nucleus	20.25	12.53
CDY16548	Canola	nucleus	26.24	12.32
Zm00001d021416_P001	Maize	cytosol	20.04	12.29
CDY45081	Canola	nucleus	26.45	12.06
Solyc05g032750.2.1	Tomato	nucleus	27.27	11.96
VIT_11s0016g01690.t01	Wine grape	cytosol	28.93	11.9
Bra020112.1-P	Field mustard	nucleus	26.24	11.89
Solyc07g041180.2.1	Tomato	nucleus	26.65	11.42
PGSC0003DMT400028119	Potato	cytosol	26.86	11.35
Bra002315.1-P	Field mustard	nucleus	27.69	11.32
KRH37453	Soybean	cytosol	28.1	11.12
PGSC0003DMT400053992	Potato	nucleus	26.03	11.1
AT5G20610.1	Thale cress	nucleus	26.65	11.08
Zm00001d029761_P001	Maize	cytosol	17.98	10.36
KRH12468	Soybean	cytosol	23.35	10.11
KRH02657	Soybean	nucleus	2.69	7.14
VIT_11s0016g01610.t01	Wine grape	cytosol	3.31	6.35
Os01t0714100-01	Rice	cytosol	3.93	4.81

Protein Annotations

EnsemblPlants:Zm00001d020517_P001	EnsemblPlants:Zm00001d020517_T001	EnsemblPlantsGene:Zm00001d020517	PANTHER:PTHR33414	PANTHER:PTHR33414:SF1	ProteinID:ONM55047.1
UniParc:UPI000844B161	UniProt:A0A1D6I4I0	MapMan:20.5.6	:	:	:

Description

Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1

Coordinates

chr7:-:120055755..120057476

Molecular Weight (calculated)

52252.5 Da

IEP (calculated)

4.780

GRAVY (calculated)

-0.319

Length

484 amino acids

Sequence
(BLAST)

001: MPLLRLHLAS PRSGLPVALD GSAVSVHFRR MSLSASTRPV AAALGAATFE EVLTLRSPVY FSRGAKVVVK YEPRAFAVSV AASTLDLGKH EVDLTRLLPL
101: SFEDLEDGGD SGFGKWSTNF RLSGPTRGAR LNVTFSCSLL TGDDTSEQHR GGEVAGLRRG SMARAVSVQA PTPLPARSRD VRVLHKVLPS LRSTRPVPSS
201: IADGGPDARK EEVAAPDCTE EGFPEAKHCT SVETVGVKTE VVFSDVAVQM ENVEDKQDGI VKAASSLPTA ALEAEGQFGA DAELEDKCIL KELSVAEPEE
301: FESPVVEDKH SRRLSCTGVT DSYKSASRKG RSRSMDASTD SVANEFLDML GIEHSPVGQP SDSDSESPRE RLWKQFEKEA LASGNAILGL GFDDGIEGPI
401: CDNVVEDFNL SAMIHEVELE LQNGSQPIDT KFRAKSLEDE ETEALMRQFG LNEKSFQSPP ETRTCGLGLY LCAKLPTYFL CKNS

Best Arabidopsis Sequence Match ( AT5G26160.1 )
(BLAST)

001: MSVNDREDSS ADLYNGQLLR DIKEVSKALY LTNGPQRPVL SLSPPVRSQS VSRTTEIGLV LSNKKKKSLV PWNWKKPLNA IAHFGQRRFD VCFLLHVHSI
101: EGLPLNLDGT KLVVQWKRKD EVMTTQPSKV LQGTAEFEET LTHRCSVYGS KHGPHRSAKY QVKLFLIYVS PVDAPWLVLG KHWIDLTRIL PLSLEEMEGT
201: RSTRKWNTSF KLSGLAESAV LNLSFDYSVV TSSVCDSTSK NVMLRRVGSV PSMDHRSPPL DDGKVVNEVS PSLSLNLSQS IDFLYEKLGE QNPQRSTGTE
301: VELGLETDKQ AADSDDSGKG VETFQQERSG LEESNDPNTE SSRIEIIDVH EILKDEDESV FEETYFIDQL SVAALKSEPS NLLPKHSVDG TPKSTFSSQV
401: ISESSESKSP SAMDDSTEKE NFLEVKSSYK AAKISMTSLS LDDITESVAN DFLNMLELEE CSYVYTSDGE PTSPRESLLR EFEKEAFASG NFLLDLNGEA
501: EYVSDIDEKS NDFSFSASSL DVGENKREGK SQLLIDRRKA KVLEDLETET LLRECDFDDN SFDNSLCVCS DGFGSPIELP VDKGLDLLPL GDNIGPSVWT
601: KGGGCIRSMN HLLFRESKEA SQLIMQVSVP VVLVSELGSD ILEILQIFAA SGIEGLCSEV NALIPLEDIM GKTIHEVVDV TKFKRTGQDC SDKSKGVVVQ
701: KPPGQLHLCS SNEEFGSSMC PSNVPLEDVT SLAIDEIYIL SIEGLKIQCS MSDQDPPSGI APKPMDQSDA LELIRFSLTL DEWLRLDQGM LENKDQDLAS
801: NGKGHTLRNK LTLALQVLLR DPSLNNEPIG ASMLALIQVE RSLDSPNSSL CSLAQEGRNK ESFGYDTQLW RITEIGLAGL KIEPGADHPW CTKSQQQSGS
901: RWLLANGTDK TIKCQASESK VIIVSNVQAT RKRLDTLWSI ISDRHHQEGD LSNSAASVPF TRNLDVIFSN EVTERS

Arabidopsis Description

PMIR2Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y219]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.