Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45081 | Canola | nucleus | 98.69 | 99.34 |
| AT5G20610.1 | Thale cress | nucleus | 71.91 | 65.98 |
| Bra002315.1-P | Field mustard | nucleus | 70.51 | 63.6 |
| VIT_11s0016g01610.t01 | Wine grape | cytosol | 14.14 | 59.92 |
| Os01t0714100-01 | Rice | cytosol | 18.26 | 49.37 |
| VIT_11s0016g01690.t01 | Wine grape | cytosol | 50.94 | 46.26 |
| KRH12468 | Soybean | cytosol | 46.07 | 44.01 |
| Solyc05g032750.2.1 | Tomato | nucleus | 44.85 | 43.39 |
| Solyc07g041180.2.1 | Tomato | nucleus | 45.51 | 43.01 |
| KRH37453 | Soybean | cytosol | 49.06 | 42.85 |
| PGSC0003DMT400053992 | Potato | nucleus | 45.51 | 42.82 |
| PGSC0003DMT400028119 | Potato | cytosol | 45.69 | 42.62 |
| KRH19252 | Soybean | nucleus | 30.99 | 42.33 |
| GSMUA_Achr1P05230_001 | Banana | nucleus | 42.42 | 41.37 |
| Zm00001d042647_P001 | Maize | mitochondrion | 6.55 | 37.23 |
| HORVU3Hr1G067440.1 | Barley | plastid | 34.36 | 36.88 |
| TraesCS3D01G248600.1 | Wheat | nucleus | 39.04 | 36.74 |
| Zm00001d011716_P001 | Maize | nucleus | 38.67 | 35.98 |
| OQU87417 | Sorghum | nucleus | 38.86 | 35.84 |
| Zm00001d043666_P001 | Maize | nucleus | 38.2 | 35.63 |
| Bra009884.1-P | Field mustard | nucleus | 28.37 | 34.24 |
| TraesCS3B01G277400.1 | Wheat | cytosol | 38.48 | 33.94 |
| KRH02657 | Soybean | nucleus | 5.52 | 32.42 |
| Zm00001d044668_P001 | Maize | extracellular | 22.94 | 32.36 |
| Zm00001d020517_P001 | Maize | mitochondrion | 11.89 | 26.24 |
| Zm00001d037913_P001 | Maize | plastid | 5.24 | 25.34 |
| Bra034930.1-P | Field mustard | cytosol | 13.02 | 23.01 |
| Bra034929.1-P | Field mustard | cytosol | 17.88 | 22.98 |
Protein Annotations
Description
AT5G20610 (E=7e-246) | unknown protein
Coordinates
chrA02:+:5088317..5091612
Molecular Weight (calculated)
117988.0 Da
IEP (calculated)
4.701
GRAVY (calculated)
-0.630
Length
1068 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSKVNSEESS SNQRLLKEVE TIGEALYVNK NNPRKSSASG PYNNTSTKPL GRTTHLAEPQ KEKKSFWNWP LRALSHVRNR RFNCCFFAQV HSIEGLPPIF
0101: QDLYLTVHWK RRDESLTTRP AKVLNGRAEF KDKLTHTCSV YGSRSGQHHS AKYEAKHFLL YASLVGSPEV DLGKHRMDLT RLLPLTLEEL QDEKSTGKWS
0201: TTFQLSGKGS GATLSMSFGY TVVGDTRSAS NAKQTSNNIT GLTRTTSTKS VSRRYDHGIV NKESRPLSEN VEEIKDLHEV LPVAQSDLAS SVNILYQKFD
0301: EEKVDPAAES QIEFEVVIKH IEPVESFLQE NEDANGTEVP LEDVKKVDEV PTAGSEEVFT ENLPPGEPLV NRNETDVSFE ESKIVGEVPI TRSEEVVEIG
0401: TESLSPEEGS NVSIKEENNG RDVREMIMKD LESALKSVEM LEAFGEDEED QEDRGGSETS FRTPNKETAA ASSSRDVASE FLDMLGIEHS PFSLSFEREP
0501: ESPRERLLRE FEMETLAAGS LFDFGTVSVD PQMECDEDFS EENESEAFDL ASLVHDIEEE YQLETQARVS NPRAKTLEDL ETASLMREWG MNENTFQNSP
0601: PHNGRNTFPP AQEPFDLPPL GDGLGPVVQT KNGGFLRSMN PSLFRNSKSG GNLIMQVSSP VVVPAEMGSG IMEILEKLAT AGIEKLSMQA NKVMPLDDIT
0701: GKTMEELLWE ASPAIDGGNR DHISQHGSGF GSGASSAANS KKFGSSSSNK NSGSEYVSLE DLAPLAMDQI EALSLEGLRI QSGMSEEDAP SEITAQSIGE
0801: ISAFQGKSGC VGLEGAAGLQ LLDIKDDRDE DDDGLMSLSL TLDEWMKLDS GDIGDEDEIN EQTSKILAAH HANPLNFIRK GEKRKGKRGR RCGLLGNNFT
0901: VALMVQLRDP LRNYEPVGAP MLSLIQVERL FVPPKPIIYS TVSEVRKTDE EEKETEVVKE DKTVLEEQGI PQYKISEVHV TGMKSETDKK PCGVKSQHQQ
1001: VQSGSRWLMA NGMGKGNNKL PLMKPKPGSI KSGDKLWSVS GSGSKWKELG KVGKWNTHVR NPNVIMPK
0101: QDLYLTVHWK RRDESLTTRP AKVLNGRAEF KDKLTHTCSV YGSRSGQHHS AKYEAKHFLL YASLVGSPEV DLGKHRMDLT RLLPLTLEEL QDEKSTGKWS
0201: TTFQLSGKGS GATLSMSFGY TVVGDTRSAS NAKQTSNNIT GLTRTTSTKS VSRRYDHGIV NKESRPLSEN VEEIKDLHEV LPVAQSDLAS SVNILYQKFD
0301: EEKVDPAAES QIEFEVVIKH IEPVESFLQE NEDANGTEVP LEDVKKVDEV PTAGSEEVFT ENLPPGEPLV NRNETDVSFE ESKIVGEVPI TRSEEVVEIG
0401: TESLSPEEGS NVSIKEENNG RDVREMIMKD LESALKSVEM LEAFGEDEED QEDRGGSETS FRTPNKETAA ASSSRDVASE FLDMLGIEHS PFSLSFEREP
0501: ESPRERLLRE FEMETLAAGS LFDFGTVSVD PQMECDEDFS EENESEAFDL ASLVHDIEEE YQLETQARVS NPRAKTLEDL ETASLMREWG MNENTFQNSP
0601: PHNGRNTFPP AQEPFDLPPL GDGLGPVVQT KNGGFLRSMN PSLFRNSKSG GNLIMQVSSP VVVPAEMGSG IMEILEKLAT AGIEKLSMQA NKVMPLDDIT
0701: GKTMEELLWE ASPAIDGGNR DHISQHGSGF GSGASSAANS KKFGSSSSNK NSGSEYVSLE DLAPLAMDQI EALSLEGLRI QSGMSEEDAP SEITAQSIGE
0801: ISAFQGKSGC VGLEGAAGLQ LLDIKDDRDE DDDGLMSLSL TLDEWMKLDS GDIGDEDEIN EQTSKILAAH HANPLNFIRK GEKRKGKRGR RCGLLGNNFT
0901: VALMVQLRDP LRNYEPVGAP MLSLIQVERL FVPPKPIIYS TVSEVRKTDE EEKETEVVKE DKTVLEEQGI PQYKISEVHV TGMKSETDKK PCGVKSQHQQ
1001: VQSGSRWLMA NGMGKGNNKL PLMKPKPGSI KSGDKLWSVS GSGSKWKELG KVGKWNTHVR NPNVIMPK
0001: MSKVNSEESS SSQKLLKEVE KISEALYVNK NPRGSVAGSN KTPTKPLSRS NLAEPKEKKS FWNWPLRAIN HVRNRRFNCC FSAQVHSIEG LPPIFQDLSL
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
Arabidopsis Description
PMIR1Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 [Source:UniProtKB/Swiss-Prot;Acc:F4K5K6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.