Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020112.1-P | Field mustard | nucleus | 99.34 | 98.69 |
| CDY16548 | Canola | nucleus | 69.18 | 71.19 |
| CDX92449 | Canola | nucleus | 64.66 | 70.0 |
| AT5G20610.1 | Thale cress | nucleus | 72.2 | 65.81 |
| VIT_11s0016g01610.t01 | Wine grape | cytosol | 14.23 | 59.92 |
| Os01t0714100-01 | Rice | cytosol | 18.38 | 49.37 |
| VIT_11s0016g01690.t01 | Wine grape | cytosol | 51.08 | 46.09 |
| KRH12468 | Soybean | cytosol | 46.37 | 44.01 |
| Solyc05g032750.2.1 | Tomato | nucleus | 44.96 | 43.21 |
| Solyc07g041180.2.1 | Tomato | nucleus | 45.62 | 42.83 |
| KRH37453 | Soybean | cytosol | 49.2 | 42.68 |
| PGSC0003DMT400053992 | Potato | nucleus | 45.62 | 42.64 |
| PGSC0003DMT400028119 | Potato | cytosol | 45.81 | 42.45 |
| KRH19252 | Soybean | nucleus | 31.01 | 42.07 |
| GSMUA_Achr1P05230_001 | Banana | nucleus | 42.51 | 41.19 |
| Zm00001d042647_P001 | Maize | mitochondrion | 6.6 | 37.23 |
| HORVU3Hr1G067440.1 | Barley | plastid | 34.31 | 36.58 |
| TraesCS3D01G248600.1 | Wheat | nucleus | 39.02 | 36.48 |
| Zm00001d011716_P001 | Maize | nucleus | 38.74 | 35.8 |
| OQU87417 | Sorghum | nucleus | 38.93 | 35.66 |
| Zm00001d043666_P001 | Maize | nucleus | 38.27 | 35.46 |
| CDY52626 | Canola | nucleus | 28.93 | 34.97 |
| CDX88218 | Canola | nucleus | 28.75 | 34.62 |
| TraesCS3B01G277400.1 | Wheat | cytosol | 38.45 | 33.69 |
| Zm00001d044668_P001 | Maize | extracellular | 22.9 | 32.1 |
| KRH02657 | Soybean | nucleus | 5.47 | 31.87 |
| Zm00001d020517_P001 | Maize | mitochondrion | 12.06 | 26.45 |
| Zm00001d037913_P001 | Maize | plastid | 5.28 | 25.34 |
| CDX80727 | Canola | cytosol | 17.53 | 23.08 |
| CDY35798 | Canola | cytosol | 17.53 | 22.99 |
Protein Annotations
| EnsemblPlants:CDY45081 | EnsemblPlantsGene:GSBRNA2T00081359001 | InterPro:IPR019448 | InterPro:NT-C2 | PANTHER:PTHR33414 | PANTHER:PTHR33414:SF1 |
| PFAM:PF10358 | PFscan:PS51840 | ProteinID:CDY45081 | ProteinID:CDY45081.1 | SEG:seg | UniParc:UPI0004EE952D |
| UniProt:A0A078I5C5 | MapMan:20.5.6 | : | : | : | : |
Description
BnaA02g04950DBnaA02g04950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5C5]
Coordinates
chrLK032613:-:99627..103489
Molecular Weight (calculated)
117333.0 Da
IEP (calculated)
4.714
GRAVY (calculated)
-0.633
Length
1061 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSKVNSEESS SNQRLLKEVE TIGEALYVNK NNPRKSSASG PYNNTSTKPL GRTTHLAEPQ KEKKSFWNWP LRALSHVRNR RFNCCFFAQV HSIEGLPPIF
0101: QDLYLTVHWK RRDESLTTRP AKVLNGRAEF KDKLTHTCSV YGSRSGQHHS AKYEAKHFLL YASLVGSPEV DLGKHRMDLT RLLPLTLEEL QDEKSTGKWS
0201: TTFQLSGKGS GATLSMSFGY TVVGDTRSAS NAKQTSNNIT GLTRTTSTKS VSRRYDHGIV NKESRPLSDN VEEIKDLHEV LPVAQSDLAS SVNILYQKFD
0301: EEKVDPAAES QIEFEVVIKH IEPVESFLQE NEDANGTEVP LEDVKKVDEE VFTENLPPGE PLVNRNETDV SFEESKIVGE VPITRSEEVV EIGTESLSPE
0401: EGSNVSIKEE NNGRDVREMI MKDLESALKS VEMLEAFGED EEDQEDRGGS ETSFRTPNKE TAAASSSRDV ASEFLDMLGI EHSPFSLSFE REPESPRERL
0501: LREFEMETLA AGSLFDFGTV SVDPQMECDE DFSEENESEA FDLASLVHDI EEEYQLETQA RVSNPRAKTL EDLETASLMR EWGMNENTFQ NSPPHNGRNT
0601: FPPAQEPFDL PPLGDGLGPV VQTKNGGFLR SMNPSLFRNS KSGGNLIMQV SSPVVVPAEM GSGIMEILEK LATAGIEKLS MQANKVMPLD DITGKTMEEL
0701: LWEASPAIDG GNRDHISQHG SGFGSGASSA ANSKKFGSSS SNKNSGSEYV SLEDLAPLAM DQIEALSLEG LRIQSGMSEE DAPSEITAQS IGEISAFQGK
0801: SGCVGLEGAA GLQLLDIKDD RDEDDDGLMS LSLTLDEWMK LDSGDIGDED EINEQTSKIL AAHHANPLNF IRKGEKRKGK RGRRCGLLGN NFTVALMVQL
0901: RDPLRNYEPV GAPMLSLIQV ERLFVPPKPI IYSTVSEVRK TDEEEKETEV VKEDKTVLEE QGIPQYKISE VHVTGMKSET DKKPCGVKSQ HQQVQSGSRW
1001: LMANGMGKGN NKLPLMKPKP GSIKSGDKLW SVSGSGSKWK ELGKVGKWNT HVRNPNVIMP K
0101: QDLYLTVHWK RRDESLTTRP AKVLNGRAEF KDKLTHTCSV YGSRSGQHHS AKYEAKHFLL YASLVGSPEV DLGKHRMDLT RLLPLTLEEL QDEKSTGKWS
0201: TTFQLSGKGS GATLSMSFGY TVVGDTRSAS NAKQTSNNIT GLTRTTSTKS VSRRYDHGIV NKESRPLSDN VEEIKDLHEV LPVAQSDLAS SVNILYQKFD
0301: EEKVDPAAES QIEFEVVIKH IEPVESFLQE NEDANGTEVP LEDVKKVDEE VFTENLPPGE PLVNRNETDV SFEESKIVGE VPITRSEEVV EIGTESLSPE
0401: EGSNVSIKEE NNGRDVREMI MKDLESALKS VEMLEAFGED EEDQEDRGGS ETSFRTPNKE TAAASSSRDV ASEFLDMLGI EHSPFSLSFE REPESPRERL
0501: LREFEMETLA AGSLFDFGTV SVDPQMECDE DFSEENESEA FDLASLVHDI EEEYQLETQA RVSNPRAKTL EDLETASLMR EWGMNENTFQ NSPPHNGRNT
0601: FPPAQEPFDL PPLGDGLGPV VQTKNGGFLR SMNPSLFRNS KSGGNLIMQV SSPVVVPAEM GSGIMEILEK LATAGIEKLS MQANKVMPLD DITGKTMEEL
0701: LWEASPAIDG GNRDHISQHG SGFGSGASSA ANSKKFGSSS SNKNSGSEYV SLEDLAPLAM DQIEALSLEG LRIQSGMSEE DAPSEITAQS IGEISAFQGK
0801: SGCVGLEGAA GLQLLDIKDD RDEDDDGLMS LSLTLDEWMK LDSGDIGDED EINEQTSKIL AAHHANPLNF IRKGEKRKGK RGRRCGLLGN NFTVALMVQL
0901: RDPLRNYEPV GAPMLSLIQV ERLFVPPKPI IYSTVSEVRK TDEEEKETEV VKEDKTVLEE QGIPQYKISE VHVTGMKSET DKKPCGVKSQ HQQVQSGSRW
1001: LMANGMGKGN NKLPLMKPKP GSIKSGDKLW SVSGSGSKWK ELGKVGKWNT HVRNPNVIMP K
0001: MSKVNSEESS SSQKLLKEVE KISEALYVNK NPRGSVAGSN KTPTKPLSRS NLAEPKEKKS FWNWPLRAIN HVRNRRFNCC FSAQVHSIEG LPPIFQDLSL
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
Arabidopsis Description
PMIR1Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 [Source:UniProtKB/Swiss-Prot;Acc:F4K5K6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.