Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
28499913
|
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH15624 | Soybean | nucleus | 86.53 | 86.45 |
| VIT_04s0008g01460.t01 | Wine grape | nucleus | 41.7 | 37.79 |
| Solyc08g062500.2.1 | Tomato | mitochondrion | 36.02 | 37.61 |
| CDX88218 | Canola | nucleus | 29.7 | 36.78 |
| CDY52626 | Canola | nucleus | 29.51 | 36.67 |
| PGSC0003DMT400021201 | Potato | cytosol | 37.03 | 36.49 |
| Bra009884.1-P | Field mustard | nucleus | 29.33 | 36.16 |
| AT5G26160.2 | Thale cress | nucleus | 30.71 | 34.32 |
| KRH12468 | Soybean | cytosol | 33.09 | 32.29 |
| KRH37453 | Soybean | cytosol | 35.01 | 31.23 |
| KRH02657 | Soybean | nucleus | 5.04 | 30.22 |
| KRH19252 | Soybean | nucleus | 21.36 | 29.8 |
| KRH60483 | Soybean | nucleus | 17.69 | 22.57 |
| KRH09253 | Soybean | cytosol | 17.51 | 22.18 |
| KRH38751 | Soybean | cytosol | 17.42 | 22.14 |
| KRH41783 | Soybean | nucleus | 17.32 | 21.53 |
Protein Annotations
| EMBL:ACUP02010733 | EnsemblPlants:KRH05392 | EnsemblPlantsGene:GLYMA_17G224700 | EntrezGene:102659940 | InterPro:IPR019448 | InterPro:NT-C2 |
| PANTHER:PTHR33414 | PANTHER:PTHR33414:SF1 | PFAM:PF10358 | PFscan:PS51840 | ProteinID:KRH05392 | ProteinID:KRH05392.1 |
| SEG:seg | UniParc:UPI0002951554 | UniProt:I1MX69 | MapMan:20.5.6 | : | : |
Description
hypothetical protein
Coordinates
chr17:+:37784485..37788635
Molecular Weight (calculated)
120923.0 Da
IEP (calculated)
5.012
GRAVY (calculated)
-0.396
Length
1091 amino acids
Sequence
(BLAST)
(BLAST)
0001: MMMKSKFECG NQDAIVDDGE ISLNNGQLLL QDIQEISKAL YAPSRPSFSS VHNRSKSAGK THLSKPQVAL TPGFLKEDLF PRDKKLSSAW NWKKPLKVLT
0101: HIGGQKFKCC FNLHVHSIEG LPLSFDGIRL CVHWKRKNNI LQTRPARVFQ GVVEFNETLS HGCSVYASRA VSGHSVKYES KRFLIYASIA GAPEHDIGIH
0201: QVDLTRLLPL TLAELGGDRS SGKWSTSFRL TGKAVGASLN VSFSYQVMKH ELMEFGGDNL NVLNLVNLKP GRPSSTSSVL DFSPIPFHSD DMILSRETLM
0301: NSSSSLSKSI SFLYQKLDEG NIHNSAQADS EHFGPLKSHV VTESESPLES NQHEPDDNEF SIIEQVETLE GDSLELGQIG NQTVDLSTVE IIDVDDIIKE
0401: DDIFIDKNTR FDSMDNICTS CVNDTMADDS KHKRSSSCVS ITCIKDADIL PETSKFLDQE CYLNVKSNYK SHRMEKKSSS LDFITESIAN DFLNMLAMES
0501: GSFGSSCDGD PKSPREKLLR EFEEEALASG NFTFDFIANE EELGTGTVVD SYGDCTVDSD LSLFIQAAEE EHARENQLLM QRRKAKILED LETDSLMQLW
0601: GLNEKDFENS QGTYSGGFGS PIELPNEESS VLPSIGQGLG SFVQTMGGGF LRSMSPSLFR NAKNCGNLIT QASNPVVLPA KMGNDILEIL QHVASDGVEE
0701: LCHHIYKLMP LQDITGKFIE HIVQKATTDE GAPVRQGSWQ HDLFEEFPCG YLTDEGTSLD TVSPEAVGPM TVNKIEARLI DGLRIQSGML NEEAPSYIRP
0801: QHAKTPAVGG RRTNWKGFPT SERIAKLQLE DCGESGNDND GLMGLSITFD QWLRLDSGTI EGDQNSEQIL KILEVHHSKI RELDELKNAT DWLKSYGRKL
0901: GHYGLLGNHL TVAFMIQLRD PLRNYEPVGV PMLVLTQVER VCISATPQDY SDFLDEKEKG MDNEALLNET SSKSMEYTNT DNEATQFRFK IKEIHLSGVL
1001: SKAGSKQRWG TATQQQSGIR WLLASGMASA AKHSSSTSKA IVLSSPLFTK KLLNEDALWS ISCVNSIMGP NSKELPAENV HIRNPDIIFP S
0101: HIGGQKFKCC FNLHVHSIEG LPLSFDGIRL CVHWKRKNNI LQTRPARVFQ GVVEFNETLS HGCSVYASRA VSGHSVKYES KRFLIYASIA GAPEHDIGIH
0201: QVDLTRLLPL TLAELGGDRS SGKWSTSFRL TGKAVGASLN VSFSYQVMKH ELMEFGGDNL NVLNLVNLKP GRPSSTSSVL DFSPIPFHSD DMILSRETLM
0301: NSSSSLSKSI SFLYQKLDEG NIHNSAQADS EHFGPLKSHV VTESESPLES NQHEPDDNEF SIIEQVETLE GDSLELGQIG NQTVDLSTVE IIDVDDIIKE
0401: DDIFIDKNTR FDSMDNICTS CVNDTMADDS KHKRSSSCVS ITCIKDADIL PETSKFLDQE CYLNVKSNYK SHRMEKKSSS LDFITESIAN DFLNMLAMES
0501: GSFGSSCDGD PKSPREKLLR EFEEEALASG NFTFDFIANE EELGTGTVVD SYGDCTVDSD LSLFIQAAEE EHARENQLLM QRRKAKILED LETDSLMQLW
0601: GLNEKDFENS QGTYSGGFGS PIELPNEESS VLPSIGQGLG SFVQTMGGGF LRSMSPSLFR NAKNCGNLIT QASNPVVLPA KMGNDILEIL QHVASDGVEE
0701: LCHHIYKLMP LQDITGKFIE HIVQKATTDE GAPVRQGSWQ HDLFEEFPCG YLTDEGTSLD TVSPEAVGPM TVNKIEARLI DGLRIQSGML NEEAPSYIRP
0801: QHAKTPAVGG RRTNWKGFPT SERIAKLQLE DCGESGNDND GLMGLSITFD QWLRLDSGTI EGDQNSEQIL KILEVHHSKI RELDELKNAT DWLKSYGRKL
0901: GHYGLLGNHL TVAFMIQLRD PLRNYEPVGV PMLVLTQVER VCISATPQDY SDFLDEKEKG MDNEALLNET SSKSMEYTNT DNEATQFRFK IKEIHLSGVL
1001: SKAGSKQRWG TATQQQSGIR WLLASGMASA AKHSSSTSKA IVLSSPLFTK KLLNEDALWS ISCVNSIMGP NSKELPAENV HIRNPDIIFP S
001: MSVNDREDSS ADLYNGQLLR DIKEVSKALY LTNGPQRPVL SLSPPVRSQS VSRTTEIGLV LSNKKKKSLV PWNWKKPLNA IAHFGQRRFD VCFLLHVHSI
101: EGLPLNLDGT KLVVQWKRKD EVMTTQPSKV LQGTAEFEET LTHRCSVYGS KHGPHRSAKY QVKLFLIYVS PVDAPWLVLG KHWIDLTRIL PLSLEEMEGT
201: RSTRKWNTSF KLSGLAESAV LNLSFDYSVV TSSVCDSTSK NVMLRRVGSV PSMDHRSPPL DDGKVVNEVS PSLSLNLSQS IDFLYEKLGE QNPQRSTGTE
301: VELGLETDKQ AADSDDSGKG VETFQQERSG LEESNDPNTE SSRIEIIDVH EILKDEDESV FEETYFIDQL SVAALKSEPS NLLPKHSVDG TPKSTFSSQV
401: ISESSESKSP SAMDDSTEKE NFLEVKSSYK AAKISMTSLS LDDITESVAN DFLNMLELEE CSYVYTSDGE PTSPRESLLR EFEKEAFASG NFLLDLNGEA
501: EYVSDIDEKS NDFSFSASSL DVGENKREGK SQLLIDRRKA KVLEDLETET LLRECDFDDN SFDNSLCVCS DGFGSPIELP VDKGLDLLPL GDNIGPSVWT
601: KGGGCIRSMN HLLFRESKEA SQLIMQVSVP VVLVSELGSD ILEILQIFAA SGIEGLCSEV NALIPLEDIM GKTIHEVVDV TKFKRTGQDC SDKSKGVVVQ
701: KPPGQLHLCS SNEEFGSSMC PSNVPLEDVT SLAIDEIYIL SIEGLKIQCS MSDQDPPSGI APKPMDQSDA LELIRFSLTL DEWLRLDQGM LENKDQDLAS
801: NGKGHTLRNK LTLALQVLLR DPSLNNEPIG ASMLALIQVE RSLDSPNSSL CSLAQEGRNK ESFGYDTQLW RITEIGLAGL KIEPGADHPW CTKSQQQSGS
901: RWLLANGTDK TIKCQASESK VIIVSNVQAT RKRLDTLWSI ISDRHHQEGD LSNSAASVPF TRNLDVIFSN EVTERS
101: EGLPLNLDGT KLVVQWKRKD EVMTTQPSKV LQGTAEFEET LTHRCSVYGS KHGPHRSAKY QVKLFLIYVS PVDAPWLVLG KHWIDLTRIL PLSLEEMEGT
201: RSTRKWNTSF KLSGLAESAV LNLSFDYSVV TSSVCDSTSK NVMLRRVGSV PSMDHRSPPL DDGKVVNEVS PSLSLNLSQS IDFLYEKLGE QNPQRSTGTE
301: VELGLETDKQ AADSDDSGKG VETFQQERSG LEESNDPNTE SSRIEIIDVH EILKDEDESV FEETYFIDQL SVAALKSEPS NLLPKHSVDG TPKSTFSSQV
401: ISESSESKSP SAMDDSTEKE NFLEVKSSYK AAKISMTSLS LDDITESVAN DFLNMLELEE CSYVYTSDGE PTSPRESLLR EFEKEAFASG NFLLDLNGEA
501: EYVSDIDEKS NDFSFSASSL DVGENKREGK SQLLIDRRKA KVLEDLETET LLRECDFDDN SFDNSLCVCS DGFGSPIELP VDKGLDLLPL GDNIGPSVWT
601: KGGGCIRSMN HLLFRESKEA SQLIMQVSVP VVLVSELGSD ILEILQIFAA SGIEGLCSEV NALIPLEDIM GKTIHEVVDV TKFKRTGQDC SDKSKGVVVQ
701: KPPGQLHLCS SNEEFGSSMC PSNVPLEDVT SLAIDEIYIL SIEGLKIQCS MSDQDPPSGI APKPMDQSDA LELIRFSLTL DEWLRLDQGM LENKDQDLAS
801: NGKGHTLRNK LTLALQVLLR DPSLNNEPIG ASMLALIQVE RSLDSPNSSL CSLAQEGRNK ESFGYDTQLW RITEIGLAGL KIEPGADHPW CTKSQQQSGS
901: RWLLANGTDK TIKCQASESK VIIVSNVQAT RKRLDTLWSI ISDRHHQEGD LSNSAASVPF TRNLDVIFSN EVTERS
Arabidopsis Description
PMIR2Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y219]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.