Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g062500.2.1 | Tomato | mitochondrion | 88.8 | 94.07 |
| VIT_04s0008g01460.t01 | Wine grape | nucleus | 44.72 | 41.11 |
| Bra009884.1-P | Field mustard | nucleus | 30.8 | 38.53 |
| CDX88218 | Canola | nucleus | 30.62 | 38.48 |
| CDY52626 | Canola | nucleus | 29.9 | 37.7 |
| KRH05392 | Soybean | mitochondrion | 36.49 | 37.03 |
| PGSC0003DMT400028119 | Potato | cytosol | 37.58 | 36.33 |
| KRH15624 | Soybean | nucleus | 35.59 | 36.08 |
| AT5G26160.2 | Thale cress | nucleus | 30.62 | 34.73 |
| PGSC0003DMT400053992 | Potato | nucleus | 35.59 | 34.71 |
| PGSC0003DMT400037294 | Potato | cytosol | 16.98 | 21.22 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400021201 | EnsemblPlantsGene:PGSC0003DMG400008209 | EntrezGene:102601950 | InterPro:IPR019448 | InterPro:NT-C2 | PANTHER:PTHR33414 |
| PANTHER:PTHR33414:SF1 | PFAM:PF10358 | PFscan:PS51840 | PGSC:PGSC0003DMG400008209 | RefSeq:XP_006351604.1 | SEG:seg |
| UniParc:UPI000295512D | UniProt:M1AES3 | MapMan:20.5.6 | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400008209]
Coordinates
chr8:-:34573900..34578731
Molecular Weight (calculated)
123203.0 Da
IEP (calculated)
5.021
GRAVY (calculated)
-0.484
Length
1107 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSWKSNSGDL NGGRLLRDIE EISKALYVHK TPQKALTFQA DNGHDSVGDT HVSKSSSNIA DDMLHNKKKS SIWSWKPLKV LTHILHRRFS CCFFLHVHSI
0101: KGLPVNFKDL SLCVNWKRKG EVMSTRPAQI CQGTAEFEET LMHSSSVYGS RTGHQHSAKY EPKYFLLYVS VIGAPALDIG KHCVDLTRLL PITMEELEEG
0201: RRNSGKWTTS FKLSGKAKGA ILNVSFGFTV SGSNSIEPSP FVRGIKPAAI DHLSERDGAS ANRSLRRVGS VPREPAGMAH SSSRSQDARS FDEVLSDQKS
0301: ELSRSISFLY KKLEDGKLGK LDDMDFFFEY LAPLKPNSGA LSQFSAENTI DDQHIEFSVS ELGIESSTKE QVRPEVCSYE NCDDTQIETA DVAYILEERS
0401: NEKSEYKQKC ESNDVYEGEY TMKSSNYEES DVCKDEMFEE LESVFLDLLT AESTELDSPV EMYDSIDQEN YMNLKSSYKS SRRVKSLSLD DVTESVANDF
0501: LEMLNIEQTS VDLSSDSCLV SPRECLVRQF EKETLSSGNS SFDFDATDNQ VEFSGIASSV HGKVACSDDF DLSSVIKDFE KEHKRGTQSL RSKRNAKMIE
0601: NLETETLMQD WGLNEKAFQN SPRISFGGFG SPIYLSPERP LKFPPIGEGL GSKMCTRNGG FLCSMSPQLF RNARNGARLI MQFASPVVLP ATMGTCSVME
0701: ILSGWASGGI SKMSAQADKL MPLEDITGRN IQEIAWEAGS RLERDERFTF WHGLLGMKKG SEDLLFHQSS GHLNSTSIID GVDLGFVFME DLVPLAMDKI
0801: ESLTIEGLRI QSNLSDNEAP SSIRPQFSEV LSSYTAGASK HWCGKESDDD EGALVELSVS LDEWLRLDAG DFSNNPDETK ERITKILAAH CAKSVDLDSS
0901: GLETGVERPE LCNNLTLALR VQLRDPLRDY EMVGISMLIL IQLDRSYAPV EQNTCGRASE RNSSSENDPK EQSIQEEIIA GESEGGIHRQ AVSQFKITEI
1001: HVAGFNNGLN DDQIWGTKSQ QQAGSRWLLS SGTGRTSKRP FSKSNAIIRS SSQLRRNMLP RDVLWSISSD FHTRDSKLAA SNAHTRNADI IFPTEGCPNL
1101: SQLEIKL
0101: KGLPVNFKDL SLCVNWKRKG EVMSTRPAQI CQGTAEFEET LMHSSSVYGS RTGHQHSAKY EPKYFLLYVS VIGAPALDIG KHCVDLTRLL PITMEELEEG
0201: RRNSGKWTTS FKLSGKAKGA ILNVSFGFTV SGSNSIEPSP FVRGIKPAAI DHLSERDGAS ANRSLRRVGS VPREPAGMAH SSSRSQDARS FDEVLSDQKS
0301: ELSRSISFLY KKLEDGKLGK LDDMDFFFEY LAPLKPNSGA LSQFSAENTI DDQHIEFSVS ELGIESSTKE QVRPEVCSYE NCDDTQIETA DVAYILEERS
0401: NEKSEYKQKC ESNDVYEGEY TMKSSNYEES DVCKDEMFEE LESVFLDLLT AESTELDSPV EMYDSIDQEN YMNLKSSYKS SRRVKSLSLD DVTESVANDF
0501: LEMLNIEQTS VDLSSDSCLV SPRECLVRQF EKETLSSGNS SFDFDATDNQ VEFSGIASSV HGKVACSDDF DLSSVIKDFE KEHKRGTQSL RSKRNAKMIE
0601: NLETETLMQD WGLNEKAFQN SPRISFGGFG SPIYLSPERP LKFPPIGEGL GSKMCTRNGG FLCSMSPQLF RNARNGARLI MQFASPVVLP ATMGTCSVME
0701: ILSGWASGGI SKMSAQADKL MPLEDITGRN IQEIAWEAGS RLERDERFTF WHGLLGMKKG SEDLLFHQSS GHLNSTSIID GVDLGFVFME DLVPLAMDKI
0801: ESLTIEGLRI QSNLSDNEAP SSIRPQFSEV LSSYTAGASK HWCGKESDDD EGALVELSVS LDEWLRLDAG DFSNNPDETK ERITKILAAH CAKSVDLDSS
0901: GLETGVERPE LCNNLTLALR VQLRDPLRDY EMVGISMLIL IQLDRSYAPV EQNTCGRASE RNSSSENDPK EQSIQEEIIA GESEGGIHRQ AVSQFKITEI
1001: HVAGFNNGLN DDQIWGTKSQ QQAGSRWLLS SGTGRTSKRP FSKSNAIIRS SSQLRRNMLP RDVLWSISSD FHTRDSKLAA SNAHTRNADI IFPTEGCPNL
1101: SQLEIKL
0001: MSKVNSEESS SSQKLLKEVE KISEALYVNK NPRGSVAGSN KTPTKPLSRS NLAEPKEKKS FWNWPLRAIN HVRNRRFNCC FSAQVHSIEG LPPIFQDLSL
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
0101: TVHWKRRDES LSTRPAKVSN GRAEFKDKLT HTCSVYGSRS GPHHSAKYEA KHFLLYVSLV GSPEIDLGKH RMDLTKLLPL TLEELQDEKS SGKWSTTFQL
0201: SGKANGATLS MSFGYTVVGD TRNPASSGST QNFRSSSNVK QTSNNTGLTR AISAKSSLGN GKSASRRYDH SIVNRESHPL SQNMEEIKDL HEILPAVQSD
0301: LGSSVNTLYQ KFDEEKVDPA NESQFEFDVV TKHIEPVESI SHEKEDANAL QSELVTGNET VVPFEEIKKA GEVPTAGSDE VGAENFPLEE PLVNGNETDV
0401: PFELLKKAGE VPTAGRDEVG TEILPPEEPL VNGNETDVPF EELMITGEAS IARSEEAVEI VTEELAPEEG NKISPKNEES VVPKDAEEVM NGEKDLKEMI
0501: MKDLESALKS VEMLEATASE DEEDRKKHGD KDKYFITPMK ETVPSCSRDV AESVACEFLD MLGIEHSPFG LSSESEPESP RERLLREFEM ETLAAGSLFD
0601: FSIEGDDPQL ECDENFPNEY ESDFEEGFDL ASLVHDIEEE YQLEAQARVS HPRAKMLEGL ETESLMREWG MNENTFQNSP PHNGRDAFHP ADFPVKEPFD
0701: LPPLGDGLGP VVQTKNGGFL RSMNPLLFRN SKAGGSLIMQ VSTPVVVPAE MGSGIMEILQ KLATAGIEKL SMQANKVMPL DDITGKTMEE VLWETSPTID
0801: IGDRDHVSER ESGDASGFVR GGERRTSFAA KPKKFGSSSG NNNFDSEYVS LEDLAPLAMD QIEALSLEGL RIQSGMSDED APSDITAQSI GDISAFQGKS
0901: GCVGLEGAAG LQLLDIKDDG DDDDDGLMGL SLTLDEWMKL DSGDIGDEDE INERTSKILA AHHANPLNFI RKGSKGEKRK GKKGRKCGLL GNTFTVALMV
1001: QLRDPLRNYE PVGAPMLSLI QVERLFVPPK PKIYSTVSEL KKTDEEEEAD ASDAKKEEKP MEEQGIPQYK ITEVHLTGMK SETDKKPWGI TTQQQQVQSG
1101: SRWLMANGMG KGNNKLPLMK PKLGSAKPGD KLWSVSGSGS KWKELGKMGK SNTHIRNPNV IMPK
Arabidopsis Description
PMIR1Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 [Source:UniProtKB/Swiss-Prot;Acc:F4K5K6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.