Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G204800.1 | Wheat | cytosol | 94.2 | 94.31 |
| TraesCS1A01G201400.1 | Wheat | cytosol | 93.58 | 93.23 |
| HORVU1Hr1G052010.1 | Barley | cytosol | 91.85 | 91.63 |
| Os10t0539700-01 | Rice | cytosol, plasma membrane | 71.23 | 69.35 |
| Zm00001d029761_P001 | Maize | cytosol | 67.04 | 64.64 |
| EER94579 | Sorghum | cytosol, nucleus, plastid | 67.65 | 63.65 |
| GSMUA_Achr5P11690_001 | Banana | endoplasmic reticulum, golgi | 31.85 | 39.15 |
| VIT_18s0122g00830.t01 | Wine grape | nucleus | 41.23 | 38.88 |
| GSMUA_Achr1P02110_001 | Banana | extracellular | 32.35 | 38.81 |
| Bra034930.1-P | Field mustard | cytosol | 28.77 | 38.58 |
| CDY35798 | Canola | cytosol | 38.4 | 38.44 |
| TraesCS5B01G357200.1 | Wheat | cytosol | 41.48 | 38.36 |
| CDX80727 | Canola | cytosol | 38.02 | 38.21 |
| Bra034929.1-P | Field mustard | cytosol | 38.89 | 37.91 |
| KRH38751 | Soybean | cytosol | 39.88 | 37.65 |
| Solyc10g006330.2.1 | Tomato | cytosol, nucleus | 40.99 | 37.6 |
| KRH60483 | Soybean | nucleus | 39.63 | 37.54 |
| KRH09253 | Soybean | cytosol | 39.88 | 37.51 |
| PGSC0003DMT400037294 | Potato | cytosol | 40.99 | 37.47 |
| AT1G42550.1 | Thale cress | nucleus | 38.4 | 36.89 |
| KRH41783 | Soybean | nucleus | 39.26 | 36.22 |
| TraesCS3B01G277400.1 | Wheat | cytosol | 22.47 | 15.03 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G215700.1 | EnsemblPlantsGene:TraesCS1B01G215700 | InterPro:IPR019448 | InterPro:NT-C2 | PANTHER:PTHR33414 | PANTHER:PTHR33414:SF3 |
| PFAM:PF10358 | PFscan:PS51840 | SEG:seg | MapMan:20.5.5 | : | : |
Description
No Description!
Coordinates
chr1B:+:391268263..391270956
Molecular Weight (calculated)
86895.5 Da
IEP (calculated)
10.079
GRAVY (calculated)
-0.342
Length
810 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLGGGGGG LSDYLDRPDA IHRRTASLAI ARSGDDGPRI MDGVGREGRR ARSSRRLSLS SWLGPRSRPL PADDTTSVDS RSREFEGSSS AKGRQSSWSS
101: WKPVRALSRI GKRRAGCLFS IEVATVRGMP ASMDGLRLAV SVRKAETKDG AMQTMPARVS HDGTAEFDET LFVKCNLYFT GGPGTGKPLK LEPRRFVVSV
201: VPVEVPDIRL GTYTVDVSSL VLDSLQKSSE GRRVRWFDRA FGLAGKATGG ELLLKLGFQL MEDAGLRLYT QAAGRSSRDV SVSPSRARVH NKNSFSVAST
301: TPKLSTSDGA ISPSMRAYRQ LVDRLNVDKR PEDDELSTAS GAGDVDYVIP EYEVVDKGVE TVKEVVHFQD QRDVLRELDS IGEQIEAIEA LMASGGKKSP
401: RGAGHQPRLD ADEEMVTVEF LRKLEAVDDD KFRKLKQPMT PRSSESQKKA PVVPDLGQSL GPAVQTRDGG FLVSMNPYNV PLASRDVPPV LAMQVSRPFV
501: LPSAMAATGF DVLQKMAAAG GPDEVRDKVA SLGRMESLTG KTPEQVGFEG IAEAVIGGRR TEGGASSSAA RSVRLVRKLA TALSEGRMER VATGIWSAGN
601: DPETLDEVLA FSLQKLEAMA VDALMIQAEM ADEEAPFEVA PAAGEANVFD ALVPSDEWSE SRGGSDGRVT LVAAIQLRDP SRRYEAVGAP MIAVVQSARM
701: LGAAGLSGGR FKVRSLHVGG VQTRCLSGVG GSASWRAERQ KLTAMQWTLA HGPGRAAKRV QTPPSSQAAR ARQQQRRPDV VWSLSSRVLA GMWLKTVRNP
801: DVKISAAGST
101: WKPVRALSRI GKRRAGCLFS IEVATVRGMP ASMDGLRLAV SVRKAETKDG AMQTMPARVS HDGTAEFDET LFVKCNLYFT GGPGTGKPLK LEPRRFVVSV
201: VPVEVPDIRL GTYTVDVSSL VLDSLQKSSE GRRVRWFDRA FGLAGKATGG ELLLKLGFQL MEDAGLRLYT QAAGRSSRDV SVSPSRARVH NKNSFSVAST
301: TPKLSTSDGA ISPSMRAYRQ LVDRLNVDKR PEDDELSTAS GAGDVDYVIP EYEVVDKGVE TVKEVVHFQD QRDVLRELDS IGEQIEAIEA LMASGGKKSP
401: RGAGHQPRLD ADEEMVTVEF LRKLEAVDDD KFRKLKQPMT PRSSESQKKA PVVPDLGQSL GPAVQTRDGG FLVSMNPYNV PLASRDVPPV LAMQVSRPFV
501: LPSAMAATGF DVLQKMAAAG GPDEVRDKVA SLGRMESLTG KTPEQVGFEG IAEAVIGGRR TEGGASSSAA RSVRLVRKLA TALSEGRMER VATGIWSAGN
601: DPETLDEVLA FSLQKLEAMA VDALMIQAEM ADEEAPFEVA PAAGEANVFD ALVPSDEWSE SRGGSDGRVT LVAAIQLRDP SRRYEAVGAP MIAVVQSARM
701: LGAAGLSGGR FKVRSLHVGG VQTRCLSGVG GSASWRAERQ KLTAMQWTLA HGPGRAAKRV QTPPSSQAAR ARQQQRRPDV VWSLSSRVLA GMWLKTVRNP
801: DVKISAAGST
001: MAGEYSGSRS SNTQLLAELE ALSENLYQKP QVSVGNRRTN SLALPRSSVP SLVTSADEVS TARAEDLTVS KPRARRLSLS PWRSRPKLEV EEEENVTQSN
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
Arabidopsis Description
PMI1Protein PLASTID MOVEMENT IMPAIRED 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.