Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400037294 | Potato | cytosol | 90.71 | 90.41 |
| VIT_18s0122g00830.t01 | Wine grape | nucleus | 59.46 | 61.12 |
| KRH60483 | Soybean | nucleus | 55.04 | 56.84 |
| CDY35798 | Canola | cytosol | 50.85 | 55.5 |
| KRH09253 | Soybean | cytosol | 53.91 | 55.28 |
| CDX80727 | Canola | cytosol | 50.17 | 54.96 |
| KRH38751 | Soybean | cytosol | 53.34 | 54.9 |
| KRH41783 | Soybean | nucleus | 54.47 | 54.78 |
| Bra034929.1-P | Field mustard | cytosol | 51.42 | 54.63 |
| AT1G42550.1 | Thale cress | nucleus | 50.74 | 53.14 |
| GSMUA_Achr11P... | Banana | extracellular | 39.98 | 51.53 |
| Bra034930.1-P | Field mustard | cytosol | 34.99 | 51.16 |
| HORVU5Hr1G087920.1 | Barley | cytosol | 4.87 | 48.31 |
| Os09t0553900-01 | Rice | plasma membrane | 48.13 | 48.13 |
| Zm00001d021416_P001 | Maize | cytosol | 42.47 | 47.53 |
| TraesCS5B01G357200.1 | Wheat | cytosol | 45.64 | 46.0 |
| TraesCS5D01G362300.1 | Wheat | cytosol | 45.53 | 46.0 |
| GSMUA_Achr1P02110_001 | Banana | extracellular | 35.11 | 45.93 |
| HORVU5Hr1G079950.1 | Barley | cytosol | 45.64 | 45.69 |
| TraesCS5A01G355000.1 | Wheat | cytosol | 45.19 | 45.65 |
| HORVU5Hr1G087970.1 | Barley | cytosol, plastid | 26.61 | 45.02 |
| GSMUA_Achr5P11690_001 | Banana | endoplasmic reticulum, golgi | 33.07 | 44.31 |
| HORVU5Hr1G087930.1 | Barley | cytosol | 19.14 | 41.63 |
| TraesCS1B01G215700.1 | Wheat | cytosol | 37.6 | 40.99 |
| OQU89905 | Sorghum | plastid | 44.96 | 40.89 |
| TraesCS1D01G204800.1 | Wheat | cytosol | 36.92 | 40.3 |
| TraesCS1A01G201400.1 | Wheat | cytosol | 36.92 | 40.1 |
| HORVU1Hr1G052010.1 | Barley | cytosol | 36.35 | 39.53 |
| Os10t0539700-01 | Rice | cytosol, plasma membrane | 37.03 | 39.3 |
| Zm00001d029761_P001 | Maize | cytosol | 35.22 | 37.02 |
| EER94579 | Sorghum | cytosol, nucleus, plastid | 35.67 | 36.59 |
| Solyc07g041180.2.1 | Tomato | nucleus | 22.88 | 17.88 |
| Solyc08g062500.2.1 | Tomato | mitochondrion | 20.5 | 17.32 |
| Solyc05g032750.2.1 | Tomato | nucleus | 21.63 | 17.3 |
Protein Annotations
| MapMan:20.5.5 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0009628 | GO:GO:0009637 | GO:GO:0009719 | GO:GO:0009787 | GO:GO:0009791 | GO:GO:0009902 |
| GO:GO:0009903 | GO:GO:0009987 | GO:GO:0010029 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0030048 |
| GO:GO:0031022 | GO:GO:1902265 | InterPro:IPR019448 | UniProt:K4CXG4 | InterPro:NT-C2 | PFAM:PF10358 |
| InterPro:PMI1 | PFscan:PS51840 | PANTHER:PTHR33414 | PANTHER:PTHR33414:SF2 | EnsemblPlantsGene:Solyc10g006330.2 | EnsemblPlants:Solyc10g006330.2.1 |
| UniParc:UPI000276AB89 | SEG:seg | : | : | : | : |
Description
Protein PLASTID MOVEMENT IMPAIRED 1 [Source:Projected from Arabidopsis thaliana (AT1G42550) UniProtKB/Swiss-Prot;Acc:Q9C8E6]
Coordinates
chr10:+:965024..971538
Molecular Weight (calculated)
97420.4 Da
IEP (calculated)
4.735
GRAVY (calculated)
-0.516
Length
883 amino acids
Sequence
(BLAST)
(BLAST)
001: MMADYITNRR NSNTQLLQEL EALSETLYQP PSHPPTTRRT TSLVLPRDSI PPIESLTSGA KNDNDTDSIV VNPKPRSRRM SLSPWRSRPK LDIQSEDNIQ
101: QQTNTSTSNA KLVKKLDGKG ADLNSEKKGL WNWKPIRALA HIGKQKLSCL FSVEVVTVQG LPTSMNGLRL SVCVRKKETK DGAVQTMPSR VTQGAADFEE
201: TLFIRCNVYY TPGTGTSNGG ARYKFEPRPF SIFVFAVDAE ELDFGKNIVD LSEMIEESVQ KSFEGSRIRQ WDTSYTLSGK AKGGEVVLKL GFQIMEKDGG
301: VGIYSQGEGG TKNAKSYSST FARKQSKTSF SVQSPRMTSL SSANWTPSQG GTTANIQGID ELNLDDEPVK EEPESKVEDL DLPDFDIVDK GIEIQDKGVE
401: MEDKDELATK EVGEEEEDGD ERSEGNSDKR SVSSSHEVVK EVVHDQMHLT RLSALDSIAQ QIKALESMFR DENQVKMEED DSESQRLDAD EETVTREFLQ
501: LLEDPGVSQQ KTDNQETPAL KLQGGGGNED NEKRESGIFI PDLAKGLGCV VQTRNGGFLA AMNPLNTVVL RKDTPKLAMQ ISKPFVLPSV PSSMIGFELF
601: QRMAAVGLEE FTSKILSMMP MEELVGKTAE QIAFEGIASA IIQGRNKEGG ASSSAAETVA VVKSMATAMN TSRNERISTG IWNISDKPST VDEILAFTLQ
701: KMEAMTVEAL KIQADIPEEE APFDVSAIKK DDDGHPLDSA VPLEDWTKDD KSDSIMISVV VQLRDPLRQF EAVGGPMIAL VQAVPIDEET NNFDDEEKKF
801: KVACLAIGGL KVRSGGKKNA WDTEKQKLTA MQWLIAYGLG KMAKKAKKTS PLKGQDLLWS ISSRVMADMW LKSIRNPDIK FIM
101: QQTNTSTSNA KLVKKLDGKG ADLNSEKKGL WNWKPIRALA HIGKQKLSCL FSVEVVTVQG LPTSMNGLRL SVCVRKKETK DGAVQTMPSR VTQGAADFEE
201: TLFIRCNVYY TPGTGTSNGG ARYKFEPRPF SIFVFAVDAE ELDFGKNIVD LSEMIEESVQ KSFEGSRIRQ WDTSYTLSGK AKGGEVVLKL GFQIMEKDGG
301: VGIYSQGEGG TKNAKSYSST FARKQSKTSF SVQSPRMTSL SSANWTPSQG GTTANIQGID ELNLDDEPVK EEPESKVEDL DLPDFDIVDK GIEIQDKGVE
401: MEDKDELATK EVGEEEEDGD ERSEGNSDKR SVSSSHEVVK EVVHDQMHLT RLSALDSIAQ QIKALESMFR DENQVKMEED DSESQRLDAD EETVTREFLQ
501: LLEDPGVSQQ KTDNQETPAL KLQGGGGNED NEKRESGIFI PDLAKGLGCV VQTRNGGFLA AMNPLNTVVL RKDTPKLAMQ ISKPFVLPSV PSSMIGFELF
601: QRMAAVGLEE FTSKILSMMP MEELVGKTAE QIAFEGIASA IIQGRNKEGG ASSSAAETVA VVKSMATAMN TSRNERISTG IWNISDKPST VDEILAFTLQ
701: KMEAMTVEAL KIQADIPEEE APFDVSAIKK DDDGHPLDSA VPLEDWTKDD KSDSIMISVV VQLRDPLRQF EAVGGPMIAL VQAVPIDEET NNFDDEEKKF
801: KVACLAIGGL KVRSGGKKNA WDTEKQKLTA MQWLIAYGLG KMAKKAKKTS PLKGQDLLWS ISSRVMADMW LKSIRNPDIK FIM
001: MAGEYSGSRS SNTQLLAELE ALSENLYQKP QVSVGNRRTN SLALPRSSVP SLVTSADEVS TARAEDLTVS KPRARRLSLS PWRSRPKLEV EEEENVTQSN
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
Arabidopsis Description
PMI1Protein PLASTID MOVEMENT IMPAIRED 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.