Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G357200.1 | Wheat | cytosol | 97.83 | 97.6 |
| TraesCS5A01G355000.1 | Wheat | cytosol | 95.31 | 95.31 |
| HORVU5Hr1G079950.1 | Barley | cytosol | 91.08 | 90.25 |
| Os09t0553900-01 | Rice | plasma membrane | 71.05 | 70.33 |
| Zm00001d021416_P001 | Maize | cytosol | 61.9 | 68.57 |
| OQU89905 | Sorghum | plastid | 66.48 | 59.84 |
| GSMUA_Achr11P... | Banana | extracellular | 44.74 | 57.08 |
| VIT_18s0122g00830.t01 | Wine grape | nucleus | 48.97 | 49.83 |
| KRH60483 | Soybean | nucleus | 47.14 | 48.19 |
| KRH09253 | Soybean | cytosol | 46.34 | 47.04 |
| KRH38751 | Soybean | cytosol | 46.11 | 46.97 |
| KRH41783 | Soybean | nucleus | 47.14 | 46.92 |
| CDY35798 | Canola | cytosol | 43.25 | 46.72 |
| Bra034929.1-P | Field mustard | cytosol | 44.05 | 46.33 |
| CDX80727 | Canola | cytosol | 42.56 | 46.15 |
| PGSC0003DMT400037294 | Potato | cytosol | 46.68 | 46.05 |
| AT1G42550.1 | Thale cress | nucleus | 44.28 | 45.91 |
| Solyc10g006330.2.1 | Tomato | cytosol, nucleus | 46.0 | 45.53 |
| Bra034930.1-P | Field mustard | cytosol | 31.24 | 45.2 |
| TraesCS1D01G204800.1 | Wheat | cytosol | 38.79 | 41.9 |
| TraesCS3D01G248600.1 | Wheat | nucleus | 23.23 | 17.89 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G362300.1 | EnsemblPlantsGene:TraesCS5D01G362300 | GO:GO:0008150 | GO:GO:0009902 | GO:GO:0009987 | GO:GO:0016043 |
| InterPro:IPR019448 | InterPro:NT-C2 | InterPro:PMI1 | ncoils:Coil | PANTHER:PTHR33414 | PANTHER:PTHR33414:SF2 |
| PFAM:PF10358 | PFscan:PS51840 | SEG:seg | MapMan:20.5.5 | : | : |
Description
No Description!
Coordinates
chr5D:-:441020101..441023157
Molecular Weight (calculated)
92868.5 Da
IEP (calculated)
4.937
GRAVY (calculated)
-0.402
Length
874 amino acids
Sequence
(BLAST)
(BLAST)
001: MADDGKPRDQ TLQELDALSR TLYQAHSNRR HASLALPRGV VGEDVVAAEA LRAEAARPRT RRLSMTSPFR SRGKAGKKED DDEDDDRGIL RAAAPSKSRS
101: FAAAASPALG GGEKKKGLWG WKPMRALSHI GMTRLGCLFS VEVAAAQGLP SSMDGLRLAV AVRKKESREG AVQTMPSRVQ QGAADFEETL FVRCHVYCSG
201: GGAGKPPAKF EPRPFLLSVI AVDAPELDFG QSTVDVSALV KESTEKSQQG ERVRQWQMAF PLAGKAKGGE LVVTLAFQIM EDGGVGLYSQ PATKTAASSS
301: SSSSALFGRK QSKTSFSITS PKVTRSEPSF TPAKGTPAQD LSGIDDFKLD GPSAPVPAPK QEQKREPEAE PEAKADDSEF PEFDFDVVDK GVEGQEEKDE
401: ANADSKKEDK DKEEGTTPAA GDEVVKEVVH DSASMWRLNE LEAITNQIKA LESLMLGDTP EEDADKPAEP QEDEAAVEGL EADEEEVTRE FLQLLEQGED
501: NGKSAAAPQV SSLKSSAKPG SGADEACYIS DLGKGLGPIV QTRDGGYLAA TNPFDIPVVR KELPKLAMQL SKPFILRGQK LPGGGAEVFQ RLCAGGCEAL
601: CEKLGALTAT DEVVGKTAEQ IAFEGMASAI ISARSKELGA SSSAAESVSL LRTMSAAMSD GRKERIATGI WNAHEAPVTV DEILPFSLQK IETMAIEALK
701: VQAGTAEEQA PFDVSPVTDA ADAGHPLDAA VPPEEWASAC AGADAVTMLV VAQLRDPMRR YEAVGAPSIV VIQAGRAATG ADGETRFKVA NMHVGGMRLK
801: TADRRSVWDG ERQRLTATHW LVAYGLGKAG KKGRPSGAAA GKVGTDVLWS MSSRVVADMW LKPMRNPDVK IAAN
101: FAAAASPALG GGEKKKGLWG WKPMRALSHI GMTRLGCLFS VEVAAAQGLP SSMDGLRLAV AVRKKESREG AVQTMPSRVQ QGAADFEETL FVRCHVYCSG
201: GGAGKPPAKF EPRPFLLSVI AVDAPELDFG QSTVDVSALV KESTEKSQQG ERVRQWQMAF PLAGKAKGGE LVVTLAFQIM EDGGVGLYSQ PATKTAASSS
301: SSSSALFGRK QSKTSFSITS PKVTRSEPSF TPAKGTPAQD LSGIDDFKLD GPSAPVPAPK QEQKREPEAE PEAKADDSEF PEFDFDVVDK GVEGQEEKDE
401: ANADSKKEDK DKEEGTTPAA GDEVVKEVVH DSASMWRLNE LEAITNQIKA LESLMLGDTP EEDADKPAEP QEDEAAVEGL EADEEEVTRE FLQLLEQGED
501: NGKSAAAPQV SSLKSSAKPG SGADEACYIS DLGKGLGPIV QTRDGGYLAA TNPFDIPVVR KELPKLAMQL SKPFILRGQK LPGGGAEVFQ RLCAGGCEAL
601: CEKLGALTAT DEVVGKTAEQ IAFEGMASAI ISARSKELGA SSSAAESVSL LRTMSAAMSD GRKERIATGI WNAHEAPVTV DEILPFSLQK IETMAIEALK
701: VQAGTAEEQA PFDVSPVTDA ADAGHPLDAA VPPEEWASAC AGADAVTMLV VAQLRDPMRR YEAVGAPSIV VIQAGRAATG ADGETRFKVA NMHVGGMRLK
801: TADRRSVWDG ERQRLTATHW LVAYGLGKAG KKGRPSGAAA GKVGTDVLWS MSSRVVADMW LKPMRNPDVK IAAN
001: MAGEYSGSRS SNTQLLAELE ALSENLYQKP QVSVGNRRTN SLALPRSSVP SLVTSADEVS TARAEDLTVS KPRARRLSLS PWRSRPKLEV EEEENVTQSN
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
Arabidopsis Description
PMI1Protein PLASTID MOVEMENT IMPAIRED 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.