Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH60483 | Soybean | nucleus | 63.33 | 63.63 |
| KRH38751 | Soybean | cytosol | 61.35 | 61.42 |
| KRH09253 | Soybean | cytosol | 61.12 | 60.98 |
| Solyc10g006330.2.1 | Tomato | cytosol, nucleus | 61.12 | 59.46 |
| KRH41783 | Soybean | nucleus | 60.65 | 59.34 |
| PGSC0003DMT400037294 | Potato | cytosol | 60.42 | 58.58 |
| CDY35798 | Canola | cytosol | 53.43 | 56.74 |
| CDX80727 | Canola | cytosol | 53.2 | 56.7 |
| HORVU5Hr1G087920.1 | Barley | cytosol | 5.82 | 56.18 |
| Bra034929.1-P | Field mustard | cytosol | 54.02 | 55.84 |
| Bra034930.1-P | Field mustard | cytosol | 38.88 | 55.3 |
| GSMUA_Achr11P... | Banana | extracellular | 44.0 | 55.18 |
| AT1G42550.1 | Thale cress | nucleus | 53.43 | 54.45 |
| Os09t0553900-01 | Rice | plasma membrane | 51.8 | 50.4 |
| TraesCS5D01G362300.1 | Wheat | cytosol | 49.83 | 48.97 |
| TraesCS5B01G357200.1 | Wheat | cytosol | 49.83 | 48.86 |
| TraesCS5A01G355000.1 | Wheat | cytosol | 49.59 | 48.74 |
| Zm00001d021416_P001 | Maize | cytosol | 44.47 | 48.42 |
| HORVU5Hr1G079950.1 | Barley | cytosol | 49.13 | 47.85 |
| GSMUA_Achr1P02110_001 | Banana | extracellular | 36.67 | 46.67 |
| HORVU5Hr1G087970.1 | Barley | cytosol, plastid | 27.94 | 45.98 |
| GSMUA_Achr5P11690_001 | Banana | endoplasmic reticulum, golgi | 35.04 | 45.68 |
| HORVU5Hr1G087930.1 | Barley | cytosol | 21.07 | 44.58 |
| OQU89905 | Sorghum | plastid | 47.96 | 42.43 |
| TraesCS1B01G215700.1 | Wheat | cytosol | 38.88 | 41.23 |
| TraesCS1A01G201400.1 | Wheat | cytosol | 38.65 | 40.84 |
| TraesCS1D01G204800.1 | Wheat | cytosol | 38.18 | 40.54 |
| HORVU1Hr1G052010.1 | Barley | cytosol | 37.95 | 40.15 |
| Os10t0539700-01 | Rice | cytosol, plasma membrane | 38.07 | 39.3 |
| Zm00001d029761_P001 | Maize | cytosol | 37.14 | 37.98 |
| EER94579 | Sorghum | cytosol, nucleus, plastid | 37.72 | 37.63 |
| VIT_11s0016g01610.t01 | Wine grape | cytosol | 6.17 | 21.03 |
| VIT_11s0016g01690.t01 | Wine grape | cytosol | 25.03 | 18.28 |
| VIT_04s0008g01460.t01 | Wine grape | nucleus | 25.26 | 18.02 |
Protein Annotations
| EntrezGene:100244427 | wikigene:100244427 | MapMan:20.5.5 | ProteinID:CCB62669 | ProteinID:CCB62669.1 | UniProt:F6I6V1 |
| EMBL:FN596759 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009902 | GO:GO:0009987 |
| GO:GO:0016043 | InterPro:IPR019448 | EntrezGene:LOC100244427 | wikigene:LOC100244427 | InterPro:NT-C2 | PFAM:PF10358 |
| InterPro:PMI1 | PFscan:PS51840 | PANTHER:PTHR33414 | PANTHER:PTHR33414:SF2 | UniParc:UPI00019851B5 | ArrayExpress:VIT_18s0122g00830 |
| EnsemblPlantsGene:VIT_18s0122g00830 | EnsemblPlants:VIT_18s0122g00830.t01 | RefSeq:XP_002273127 | RefSeq:XP_002273127.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr18:+:599271..602328
Molecular Weight (calculated)
94448.4 Da
IEP (calculated)
5.346
GRAVY (calculated)
-0.468
Length
859 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEETNPRNS STQLLAELEE LSQSLYQSHT ARRTASLALP RSSVPPILSA DEAKNEEKSS TRGRSRRMSL SPWRSRPKLD DGNGQKDQPK PLSQQPITKL
101: NEKAASAEKK GIWNWKPIRA LSHIGMQKLS CLFSVEVVTV QGLPASMNGL RLSVCVRKKE TKEGAVHTMP SRVSQGAADF EETMFLKCHV YCSYDSGKQQ
201: KFEPRPFLIY VFAVDAQELD FGRSLVDLSL LIQESIEKSA EGTRVRQWDM SFNLSGKAKG GELVLKLGFQ IMEKDGGVGI YSQSEGLKSG KSMNFASSFG
301: RKQSKSSFSI PSPRMSSRSE TWTPSQGGAT GDLQGIDDLN LDEPAPVPST SPSIQKSEET ESKIEDLDVL DFDVVDKGVE IQDKEEAGEG EMKENVDKRS
401: VSSEVVKEVV HDQVHLTRLT ELDSIAQQIK ALESMMGGEK LNKTEEETDV PRLDADEETV TREFLQMLEA EDDSELRFNQ SDIPPLKLEG VEDSTEADTM
501: VFLPDLGKGL GCVVQTRDGG YLAAMNPLDT AVTRKDTPKL AMQLSKALVL TSHKSMNGFE LFQKMAATGL EELSSEILSS MPLDELIGKT AEQIAFEGIA
601: SAIILGRNKE GASSSAARTV AAVKTMATAM NTGRRERIST GIWNVNEDPL TVDEILAFSM QKIEAMAVEA LKIQADMAEE DAPFEVSSLV GKTATTSGKD
701: QNHPLASAIP LEEWMKNSSL NTSDGDSESQ TTLTLTVVVQ LRDPIRRFES VGGPVIVLIH ATHADVKPKT YDEDKRFKVG SLHIGGLKVK KGGKRNVWDT
801: EKQRLTAMQW LLAFGLGKAG KKGKHVPSKS QDILWSISSR VMADMWLKSM RNPDIKFTK
101: NEKAASAEKK GIWNWKPIRA LSHIGMQKLS CLFSVEVVTV QGLPASMNGL RLSVCVRKKE TKEGAVHTMP SRVSQGAADF EETMFLKCHV YCSYDSGKQQ
201: KFEPRPFLIY VFAVDAQELD FGRSLVDLSL LIQESIEKSA EGTRVRQWDM SFNLSGKAKG GELVLKLGFQ IMEKDGGVGI YSQSEGLKSG KSMNFASSFG
301: RKQSKSSFSI PSPRMSSRSE TWTPSQGGAT GDLQGIDDLN LDEPAPVPST SPSIQKSEET ESKIEDLDVL DFDVVDKGVE IQDKEEAGEG EMKENVDKRS
401: VSSEVVKEVV HDQVHLTRLT ELDSIAQQIK ALESMMGGEK LNKTEEETDV PRLDADEETV TREFLQMLEA EDDSELRFNQ SDIPPLKLEG VEDSTEADTM
501: VFLPDLGKGL GCVVQTRDGG YLAAMNPLDT AVTRKDTPKL AMQLSKALVL TSHKSMNGFE LFQKMAATGL EELSSEILSS MPLDELIGKT AEQIAFEGIA
601: SAIILGRNKE GASSSAARTV AAVKTMATAM NTGRRERIST GIWNVNEDPL TVDEILAFSM QKIEAMAVEA LKIQADMAEE DAPFEVSSLV GKTATTSGKD
701: QNHPLASAIP LEEWMKNSSL NTSDGDSESQ TTLTLTVVVQ LRDPIRRFES VGGPVIVLIH ATHADVKPKT YDEDKRFKVG SLHIGGLKVK KGGKRNVWDT
801: EKQRLTAMQW LLAFGLGKAG KKGKHVPSKS QDILWSISSR VMADMWLKSM RNPDIKFTK
001: MAGEYSGSRS SNTQLLAELE ALSENLYQKP QVSVGNRRTN SLALPRSSVP SLVTSADEVS TARAEDLTVS KPRARRLSLS PWRSRPKLEV EEEENVTQSN
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
Arabidopsis Description
PMI1Protein PLASTID MOVEMENT IMPAIRED 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.