Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G215700.1 | Wheat | cytosol | 91.63 | 91.85 |
| TraesCS1A01G201400.1 | Wheat | cytosol | 91.5 | 91.39 |
| TraesCS1D01G204800.1 | Wheat | cytosol | 89.9 | 90.23 |
| Os10t0539700-01 | Rice | cytosol, plasma membrane | 70.81 | 69.11 |
| Zm00001d029761_P001 | Maize | cytosol | 67.49 | 65.24 |
| EER94579 | Sorghum | cytosol, nucleus, plastid | 67.73 | 63.88 |
| HORVU5Hr1G087920.1 | Barley | cytosol | 4.93 | 44.94 |
| GSMUA_Achr1P02110_001 | Banana | extracellular | 32.51 | 39.11 |
| GSMUA_Achr5P11690_001 | Banana | endoplasmic reticulum, golgi | 31.65 | 39.0 |
| VIT_18s0122g00830.t01 | Wine grape | nucleus | 40.15 | 37.95 |
| Bra034930.1-P | Field mustard | cytosol | 28.2 | 37.91 |
| CDY35798 | Canola | cytosol | 37.32 | 37.45 |
| KRH38751 | Soybean | cytosol | 39.16 | 37.06 |
| CDX80727 | Canola | cytosol | 36.7 | 36.97 |
| HORVU5Hr1G079950.1 | Barley | cytosol | 40.02 | 36.85 |
| KRH60483 | Soybean | nucleus | 38.79 | 36.84 |
| Bra034929.1-P | Field mustard | cytosol | 37.56 | 36.7 |
| KRH09253 | Soybean | cytosol | 38.92 | 36.7 |
| HORVU5Hr1G087970.1 | Barley | cytosol, plastid | 23.4 | 36.4 |
| Solyc10g006330.2.1 | Tomato | cytosol, nucleus | 39.53 | 36.35 |
| PGSC0003DMT400037294 | Potato | cytosol | 39.66 | 36.34 |
| KRH41783 | Soybean | nucleus | 38.55 | 35.65 |
| AT1G42550.1 | Thale cress | nucleus | 36.82 | 35.47 |
| HORVU5Hr1G087930.1 | Barley | cytosol | 15.89 | 31.77 |
| HORVU3Hr1G067440.1 | Barley | plastid | 19.21 | 15.68 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G052010.1 | EnsemblPlantsGene:HORVU1Hr1G052010 | InterPro:IPR019448 | InterPro:NT-C2 | PANTHER:PTHR33414 | PANTHER:PTHR33414:SF3 |
| PFAM:PF10358 | PFscan:PS51840 | SEG:seg | UniParc:UPI000B484313 | UniProt:A0A287FKD1 | MapMan:20.5.5 |
Description
No Description!
Coordinates
chrchr1H:+:385625811..385629388
Molecular Weight (calculated)
86865.5 Da
IEP (calculated)
9.981
GRAVY (calculated)
-0.326
Length
812 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLGGGGGG GMSDYLDRPN AIHRRTASLA IARSGDDGPR IMDGVGREGR RARSSRRLSL SSWLGPRSRP LPPDDAASVD SSRDFEGSGS AKGKPPSAWS
101: RWKPVRAISR IGKRRAGCLF SIEVAAVRGV PASMDGLRLA VSVRKAETKD GAMQTMPARV SHDGTAEFDE TLFVKCNLYF TGGPGTGKPL KLEPRRFVVS
201: VVPVEVPDIR LGTYTVDVSS LVLDSLQKSS EGRRVRWFDR AFGLAGKAAG GELLLKLGFQ LMEDAGLRLY TQAAGRSPRD VSVSPSRARV HNKNSFSVAS
301: TTTHKLSPSD GAISPSMRAY RQLVDRLNVD KRPEDDELST ASGAGDGDYA IPEYEVIDKG VETVKEVVHF QDQRDVLREL DSIGEQIEAI EALMASGGRK
401: SPRGAGQQPR LDADEEMVTV EFLRKLEAVD DDKFRKLKQP MTPRSNEPQK KTALVPDLGQ SLGSAVQTRD GGFLVSLNPF NVPLASRDVP PVLAMQVSRP
501: FVLPSAMAAT GFDVLQKMAA AGAADEVRDK VASLGCMESL TGKTPEQVGF EGIAEAVIGG RRTEGDASSS AARSVRLVRK LATALSEGRM ERVATGIWSA
601: GNDPETLDEI LAFSLQKLEA MAVDALMIQA EMADEEAPFE VAPAAGDANV FDALVPSDEW SDSRGGSDGR VTLVAAIQLR DPSRRYEAVG APMIAVVQSA
701: RMLGAAGLSG GRFKVRSLHV GGVQARCLSG AGGSASWRAE RQKLTAMQWT LAHGRGRAAK RVQTPPSSQT ARVRQQQQRP DVVWSLSSRV LAGMWLKTVR
801: NPDVKISAAG ST
101: RWKPVRAISR IGKRRAGCLF SIEVAAVRGV PASMDGLRLA VSVRKAETKD GAMQTMPARV SHDGTAEFDE TLFVKCNLYF TGGPGTGKPL KLEPRRFVVS
201: VVPVEVPDIR LGTYTVDVSS LVLDSLQKSS EGRRVRWFDR AFGLAGKAAG GELLLKLGFQ LMEDAGLRLY TQAAGRSPRD VSVSPSRARV HNKNSFSVAS
301: TTTHKLSPSD GAISPSMRAY RQLVDRLNVD KRPEDDELST ASGAGDGDYA IPEYEVIDKG VETVKEVVHF QDQRDVLREL DSIGEQIEAI EALMASGGRK
401: SPRGAGQQPR LDADEEMVTV EFLRKLEAVD DDKFRKLKQP MTPRSNEPQK KTALVPDLGQ SLGSAVQTRD GGFLVSLNPF NVPLASRDVP PVLAMQVSRP
501: FVLPSAMAAT GFDVLQKMAA AGAADEVRDK VASLGCMESL TGKTPEQVGF EGIAEAVIGG RRTEGDASSS AARSVRLVRK LATALSEGRM ERVATGIWSA
601: GNDPETLDEI LAFSLQKLEA MAVDALMIQA EMADEEAPFE VAPAAGDANV FDALVPSDEW SDSRGGSDGR VTLVAAIQLR DPSRRYEAVG APMIAVVQSA
701: RMLGAAGLSG GRFKVRSLHV GGVQARCLSG AGGSASWRAE RQKLTAMQWT LAHGRGRAAK RVQTPPSSQT ARVRQQQQRP DVVWSLSSRV LAGMWLKTVR
801: NPDVKISAAG ST
001: MAGEYSGSRS SNTQLLAELE ALSENLYQKP QVSVGNRRTN SLALPRSSVP SLVTSADEVS TARAEDLTVS KPRARRLSLS PWRSRPKLEV EEEENVTQSN
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
Arabidopsis Description
PMI1Protein PLASTID MOVEMENT IMPAIRED 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.