Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G087930.1 | Barley | cytosol | 70.11 | 90.15 |
| HORVU5Hr1G079950.1 | Barley | cytosol | 100.0 | 59.18 |
| Bra034930.1-P | Field mustard | cytosol | 41.0 | 35.43 |
| GSMUA_Achr11P... | Banana | extracellular | 44.64 | 34.01 |
| VIT_18s0122g00830.t01 | Wine grape | nucleus | 45.98 | 27.94 |
| KRH60483 | Soybean | nucleus | 44.64 | 27.25 |
| PGSC0003DMT400037294 | Potato | cytosol | 45.79 | 26.98 |
| Solyc10g006330.2.1 | Tomato | cytosol, nucleus | 45.02 | 26.61 |
| KRH41783 | Soybean | nucleus | 44.64 | 26.54 |
| KRH38751 | Soybean | cytosol | 42.91 | 26.11 |
| AT1G42550.1 | Thale cress | nucleus | 41.95 | 25.98 |
| CDY35798 | Canola | cytosol | 40.23 | 25.96 |
| Bra034929.1-P | Field mustard | cytosol | 41.0 | 25.75 |
| KRH09253 | Soybean | cytosol | 42.34 | 25.67 |
| CDX80727 | Canola | cytosol | 38.89 | 25.19 |
| HORVU1Hr1G052010.1 | Barley | cytosol | 36.4 | 23.4 |
| HORVU3Hr1G067440.1 | Barley | plastid | 22.8 | 11.96 |
| HORVU5Hr1G087920.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G087970.1 | EnsemblPlantsGene:HORVU5Hr1G087970 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009902 |
| GO:GO:0009987 | GO:GO:0016043 | InterPro:PMI1 | ncoils:Coil | PANTHER:PTHR33414 | PANTHER:PTHR33414:SF2 |
| SEG:seg | UniParc:UPI000B46FE40 | UniProt:A0A287S5T7 | MapMan:20.5.5 | : | : |
Description
No Description!
Coordinates
chrchr5H:-:580199458..580201573
Molecular Weight (calculated)
55224.4 Da
IEP (calculated)
4.140
GRAVY (calculated)
-0.380
Length
522 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFPLTGKAK GGELVVTLAF QIMEDGGVGL YSQPATKTAA SSSTSSALFA RKQSKTSFSI ASPKVTRSEP SFTPAKATPS QDLSGIDDFK LDGPSAPAPE
101: PKQEQEKKEP EPQPEPEAKV DDSDFPEFDF DVVDKGVEGQ EEKDEANADI KKEDKDKEEE EESSTPAAGD EVVKEVVHDS ASMWRLNELE AITNQIKALE
201: SLMLGDTPEE EADKPAEQQE DEAAVEGLEA DEEEVTREFL QLLEQGEDNG KSAAAPQVSS LKSNAKPGSS ADEACYVSDL GKGLGPIVQT RDGGYLAATN
301: PFDIPVAKKE LPKLAMQLSK PFILRGQKLP GGGAEVFQRL CAGGCEALCA KLAALTATDE VVGKTAEQIA FEGMASAIIS ARSKELGASS SAAESVSLLR
401: TMSAAMSDGR KERIVTGIWN AHEAPVTVDE ILPFSLQKIE TMAIEALKVQ AGIAEDQAPF DVSPATDAPD AGHPLDTAVP PEEWASACAG SDAVTMLVVA
501: QLRDPMRRYE AVGAPSIVVI QA
101: PKQEQEKKEP EPQPEPEAKV DDSDFPEFDF DVVDKGVEGQ EEKDEANADI KKEDKDKEEE EESSTPAAGD EVVKEVVHDS ASMWRLNELE AITNQIKALE
201: SLMLGDTPEE EADKPAEQQE DEAAVEGLEA DEEEVTREFL QLLEQGEDNG KSAAAPQVSS LKSNAKPGSS ADEACYVSDL GKGLGPIVQT RDGGYLAATN
301: PFDIPVAKKE LPKLAMQLSK PFILRGQKLP GGGAEVFQRL CAGGCEALCA KLAALTATDE VVGKTAEQIA FEGMASAIIS ARSKELGASS SAAESVSLLR
401: TMSAAMSDGR KERIVTGIWN AHEAPVTVDE ILPFSLQKIE TMAIEALKVQ AGIAEDQAPF DVSPATDAPD AGHPLDTAVP PEEWASACAG SDAVTMLVVA
501: QLRDPMRRYE AVGAPSIVVI QA
001: MAGEYSGSRS SNTQLLAELE ALSENLYQKP QVSVGNRRTN SLALPRSSVP SLVTSADEVS TARAEDLTVS KPRARRLSLS PWRSRPKLEV EEEENVTQSN
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
Arabidopsis Description
PMI1Protein PLASTID MOVEMENT IMPAIRED 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.