Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G087970.1 | Barley | cytosol, plastid | 90.15 | 70.11 |
| HORVU5Hr1G079950.1 | Barley | cytosol | 99.26 | 45.69 |
| GSMUA_Achr11P... | Banana | extracellular | 48.52 | 28.76 |
| Bra034930.1-P | Field mustard | cytosol | 38.92 | 26.16 |
| KRH60483 | Soybean | nucleus | 44.58 | 21.17 |
| VIT_18s0122g00830.t01 | Wine grape | nucleus | 44.58 | 21.07 |
| KRH41783 | Soybean | nucleus | 43.84 | 20.27 |
| CDY35798 | Canola | cytosol | 39.9 | 20.02 |
| Bra034929.1-P | Field mustard | cytosol | 40.89 | 19.98 |
| KRH38751 | Soybean | cytosol | 42.12 | 19.93 |
| AT1G42550.1 | Thale cress | nucleus | 40.89 | 19.69 |
| KRH09253 | Soybean | cytosol | 41.63 | 19.63 |
| PGSC0003DMT400037294 | Potato | cytosol | 42.36 | 19.41 |
| CDX80727 | Canola | cytosol | 38.42 | 19.35 |
| Solyc10g006330.2.1 | Tomato | cytosol, nucleus | 41.63 | 19.14 |
| HORVU1Hr1G052010.1 | Barley | cytosol | 31.77 | 15.89 |
| HORVU3Hr1G067440.1 | Barley | plastid | 21.92 | 8.94 |
| HORVU5Hr1G087920.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G087930.1 | EnsemblPlantsGene:HORVU5Hr1G087930 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009902 |
| GO:GO:0009987 | GO:GO:0016043 | InterPro:PMI1 | ncoils:Coil | PANTHER:PTHR33414 | PANTHER:PTHR33414:SF2 |
| SEG:seg | UniParc:UPI000B4658E5 | UniProt:A0A287S5Z9 | MapMan:20.5.5 | : | : |
Description
No Description!
Coordinates
chrchr5H:-:580109087..580110306
Molecular Weight (calculated)
43156.9 Da
IEP (calculated)
4.108
GRAVY (calculated)
-0.571
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: XXAVDAPELD FGQSTVDLSA LVKESTEKSQ QGERVRQWEM AFPLTGKAKG GELVVTLAFQ IMEDGGVGLY SQPATKTAAS SSTSSALFAR KQSKTSFSIA
101: SPKVTRSEPS FTPAKATPSQ DLSGIDDFKL DGPSAPAPEP KQEQEKKEPE PQPEPEAKVD DSDFPEFDFD VVDKGVEQDE ANADIKKEDK DKEEEEESST
201: PAAGDEVVKE VVHDSASMWR LNELEAITNQ IKALESLMLG DTPEEEADKP AEQQEDEAAV EGLEADEEEV TREFLQLLEQ GEDNGKSAAA PQVSSLKSNA
301: KPGSSADEAC YVSDLGKGLG PIVQTRDGGY LAATNPFDIP VAKKELPKLA MQLSKPFILR GQKLPGGGAE VFQRLCAGGC EALCAKLAAL TATDEVVGKT
401: AEQIAF
101: SPKVTRSEPS FTPAKATPSQ DLSGIDDFKL DGPSAPAPEP KQEQEKKEPE PQPEPEAKVD DSDFPEFDFD VVDKGVEQDE ANADIKKEDK DKEEEEESST
201: PAAGDEVVKE VVHDSASMWR LNELEAITNQ IKALESLMLG DTPEEEADKP AEQQEDEAAV EGLEADEEEV TREFLQLLEQ GEDNGKSAAA PQVSSLKSNA
301: KPGSSADEAC YVSDLGKGLG PIVQTRDGGY LAATNPFDIP VAKKELPKLA MQLSKPFILR GQKLPGGGAE VFQRLCAGGC EALCAKLAAL TATDEVVGKT
401: AEQIAF
001: MAGEYSGSRS SNTQLLAELE ALSENLYQKP QVSVGNRRTN SLALPRSSVP SLVTSADEVS TARAEDLTVS KPRARRLSLS PWRSRPKLEV EEEENVTQSN
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
Arabidopsis Description
PMI1Protein PLASTID MOVEMENT IMPAIRED 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.