Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G201400.1 | Wheat | cytosol | 69.95 | 71.59 |
| TraesCS1B01G215700.1 | Wheat | cytosol | 69.35 | 71.23 |
| HORVU1Hr1G052010.1 | Barley | cytosol | 69.11 | 70.81 |
| TraesCS1D01G204800.1 | Wheat | cytosol | 68.51 | 70.46 |
| Zm00001d029761_P001 | Maize | cytosol | 68.27 | 67.62 |
| EER94579 | Sorghum | cytosol, nucleus, plastid | 69.35 | 67.02 |
| Os09t0553900-01 | Rice | plasma membrane | 42.43 | 39.98 |
| GSMUA_Achr5P11690_001 | Banana | endoplasmic reticulum, golgi | 31.61 | 39.91 |
| GSMUA_Achr1P02110_001 | Banana | extracellular | 32.21 | 39.7 |
| CDX80727 | Canola | cytosol | 37.38 | 38.59 |
| CDY35798 | Canola | cytosol | 37.38 | 38.44 |
| Bra034930.1-P | Field mustard | cytosol | 27.88 | 38.41 |
| VIT_18s0122g00830.t01 | Wine grape | nucleus | 39.3 | 38.07 |
| Bra034929.1-P | Field mustard | cytosol | 37.86 | 37.91 |
| KRH60483 | Soybean | nucleus | 38.82 | 37.78 |
| KRH09253 | Soybean | cytosol | 39.06 | 37.75 |
| KRH38751 | Soybean | cytosol | 38.58 | 37.41 |
| Solyc10g006330.2.1 | Tomato | cytosol, nucleus | 39.3 | 37.03 |
| KRH41783 | Soybean | nucleus | 38.94 | 36.9 |
| AT1G42550.1 | Thale cress | nucleus | 37.26 | 36.77 |
| PGSC0003DMT400037294 | Potato | cytosol | 38.7 | 36.34 |
| Os01t0714100-01 | Rice | cytosol | 8.77 | 18.48 |
Protein Annotations
| EMBL:AK120628 | EnsemblPlants:Os10t0539700-01 | EnsemblPlantsGene:Os10g0539700 | EntrezGene:4349250 | InterPro:IPR019448 | InterPro:NT-C2 |
| PANTHER:PTHR33414 | PANTHER:PTHR33414:SF3 | PFAM:PF10358 | PFscan:PS51840 | ProteinID:AAG46113.1 | ProteinID:AAP54841.1 |
| ProteinID:BAF27095.1 | ProteinID:BAT11852.1 | RefSeq:XP_015612832.1 | SEG:seg | UniParc:UPI000009FA29 | UniProt:Q7XCN0 |
| MapMan:20.5.5 | : | : | : | : | : |
Description
Conserved hypothetical protein. (Os10t0539700-01)
Coordinates
chr10:+:21036241..21039023
Molecular Weight (calculated)
87599.5 Da
IEP (calculated)
9.123
GRAVY (calculated)
-0.215
Length
832 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGSGGEAMA SSGLDLGEYL DRPDAIHRRA ASVAIVRSGG GDGPRIVDGG RDDRRARSSR RLSLSSWRRP AGGETSVESR RYGFTAAAAA EVGGKTRAAA
101: IWEWKPVRVL SRIGKRRCGC LLSVEVAGVR GVPASMDGLR LAVTVRKAET KDGAVQTMPA TVRGGCADFV ETLFVRCNIY FAGGAGTGKP LKLEPRRFVV
201: SVVPAEAPGV RLGAHAVDVS SLVLDSLQKS SEGRRVRWFD TAVTLSGKAT GGELLLKLGF QLMDDAGLCL YTQAATEKVD VVDDVSPALA RAHNKNSFSV
301: ARTSGPKLSA SDAAISPSMR AYKQLIDRLS VDEHGDPVTS LIPRKLADDE LSGDVGLPEY EVVDKGVETV KEVVHYHAHR DVLKELDSIA EQIEAIEALM
401: TNGGKKSPPS PKKVDQKQCL DADEEMVTVE FLRKLEVVDD KGRKLKQPMT PRSESEKKAA AAAPPVVPDL GPGLGTAVQT RDGGFLVSMN PFDLPLEKGD
501: APPKLAMQVS RPFVLPSSMA ATGFDVLQKM AAAGGADEVR DKVARLGGMD NLTGKTPEQV GFEGIAEAVI GGRRTEGASS SAARSVRLVR KLAAAVSDGR
601: SERVATGIWT AADDPETLEE VIAFSLQKLE AMAVDALMIQ AEMADEDAPF EVAPAAGDAT TVFDALVSPD EWSESRGSDG RVTVVAAIQL RDPSRRYEAV
701: GAPMVAVVQS ARLLGAAGNS GGRFKVRSLH VGGVQLRCPV GGGAGGGRAS WGAERQKLTA MQWALAHGPA RAAGRRARTP TTTTTPSSQA RQRPDVVWSL
801: SSRVLAGMWL KTVRNPDVRV GATAAGSGGG GN
101: IWEWKPVRVL SRIGKRRCGC LLSVEVAGVR GVPASMDGLR LAVTVRKAET KDGAVQTMPA TVRGGCADFV ETLFVRCNIY FAGGAGTGKP LKLEPRRFVV
201: SVVPAEAPGV RLGAHAVDVS SLVLDSLQKS SEGRRVRWFD TAVTLSGKAT GGELLLKLGF QLMDDAGLCL YTQAATEKVD VVDDVSPALA RAHNKNSFSV
301: ARTSGPKLSA SDAAISPSMR AYKQLIDRLS VDEHGDPVTS LIPRKLADDE LSGDVGLPEY EVVDKGVETV KEVVHYHAHR DVLKELDSIA EQIEAIEALM
401: TNGGKKSPPS PKKVDQKQCL DADEEMVTVE FLRKLEVVDD KGRKLKQPMT PRSESEKKAA AAAPPVVPDL GPGLGTAVQT RDGGFLVSMN PFDLPLEKGD
501: APPKLAMQVS RPFVLPSSMA ATGFDVLQKM AAAGGADEVR DKVARLGGMD NLTGKTPEQV GFEGIAEAVI GGRRTEGASS SAARSVRLVR KLAAAVSDGR
601: SERVATGIWT AADDPETLEE VIAFSLQKLE AMAVDALMIQ AEMADEDAPF EVAPAAGDAT TVFDALVSPD EWSESRGSDG RVTVVAAIQL RDPSRRYEAV
701: GAPMVAVVQS ARLLGAAGNS GGRFKVRSLH VGGVQLRCPV GGGAGGGRAS WGAERQKLTA MQWALAHGPA RAAGRRARTP TTTTTPSSQA RQRPDVVWSL
801: SSRVLAGMWL KTVRNPDVRV GATAAGSGGG GN
001: MAGEYSGSRS SNTQLLAELE ALSENLYQKP QVSVGNRRTN SLALPRSSVP SLVTSADEVS TARAEDLTVS KPRARRLSLS PWRSRPKLEV EEEENVTQSN
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
Arabidopsis Description
PMI1Protein PLASTID MOVEMENT IMPAIRED 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.