Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- plastid 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G215700.1 | Wheat | cytosol | 94.31 | 94.2 |
| TraesCS1A01G201400.1 | Wheat | cytosol | 91.84 | 91.39 |
| HORVU1Hr1G052010.1 | Barley | cytosol | 90.23 | 89.9 |
| Os10t0539700-01 | Rice | cytosol, plasma membrane | 70.46 | 68.51 |
| Zm00001d029761_P001 | Maize | cytosol | 69.22 | 66.67 |
| EER94579 | Sorghum | cytosol, nucleus, plastid | 68.97 | 64.81 |
| GSMUA_Achr5P11690_001 | Banana | endoplasmic reticulum, golgi | 32.26 | 39.61 |
| GSMUA_Achr1P02110_001 | Banana | extracellular | 32.63 | 39.11 |
| TraesCS5D01G362300.1 | Wheat | cytosol | 41.9 | 38.79 |
| VIT_18s0122g00830.t01 | Wine grape | nucleus | 40.54 | 38.18 |
| Bra034930.1-P | Field mustard | cytosol | 28.18 | 37.75 |
| CDY35798 | Canola | cytosol | 37.45 | 37.45 |
| CDX80727 | Canola | cytosol | 37.21 | 37.34 |
| KRH09253 | Soybean | cytosol | 39.68 | 37.28 |
| KRH38751 | Soybean | cytosol | 39.43 | 37.18 |
| PGSC0003DMT400037294 | Potato | cytosol | 40.67 | 37.13 |
| KRH60483 | Soybean | nucleus | 39.18 | 37.08 |
| Bra034929.1-P | Field mustard | cytosol | 38.07 | 37.06 |
| Solyc10g006330.2.1 | Tomato | cytosol, nucleus | 40.3 | 36.92 |
| AT1G42550.1 | Thale cress | nucleus | 37.95 | 36.42 |
| KRH41783 | Soybean | nucleus | 38.81 | 35.76 |
| TraesCS3D01G248600.1 | Wheat | nucleus | 22.0 | 15.68 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G204800.1 | EnsemblPlantsGene:TraesCS1D01G204800 | InterPro:IPR019448 | InterPro:NT-C2 | PANTHER:PTHR33414 | PANTHER:PTHR33414:SF3 |
| PFAM:PF10358 | PFscan:PS51840 | SEG:seg | MapMan:20.5.5 | : | : |
Description
No Description!
Coordinates
chr1D:+:289960895..289963324
Molecular Weight (calculated)
86644.4 Da
IEP (calculated)
10.182
GRAVY (calculated)
-0.323
Length
809 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLGGGGGL SDYLDRPNAI HRRTASLAIA RSGDDGPRIM DGVGREGRRA RSSRRLSLSS WLGPRSRPLP ADDTTSVDSR SRGFEGSGSA KGKPSAWSSW
101: KPVRALSRIG KRRAGCLFSI EVAAVRGVPA SMDGLRLAVS VRKAETKDGA MQTMPARVSH DGTAEFDETL FVKCNLYFTG GPGTGKPLKL EPRRFVLSVV
201: PVEVPDIRLG TYTVDVSSLV LDSLQKSSEG RRVRWFDRAF GLAGKAAGGE LLLKLGFQLM EDAGLRLYTQ AAGRSSRDVS VSPSRARVHN KNSFSVASTT
301: PKLSTSDGAI SPSMRAYRQL VDRLNIDKRP EDDELSTASG AGDVDYVIPE YEVVDKGVET VKEVVHFQDQ RDVLRELDSI GEQIEAIEAL MASGGKKSPT
401: GAGQQPRLDA DEEMVTVEFL RKLEAVDDDK FRKLKQPMTP RSSESQKKAP VVPDLGQSLG PAVQTRDGGF LVSMNPYNVP LASRDVPPVL AMQVSRPFVL
501: PSAMAATGFD VLQKMAAAGG PDEVRDKVAS LGRMESLTGK TPEQVGFEGI AEAVIGGRRT EGGASSSAAR SVRLVRKLAT ALSEGRMERV ATGIWSAGND
601: PETLDEVLAF SLQKLEAMAV DALMIQAEMA DEEPPFEVAP AAGETNVFDA LVPSDEWSES RGGSDGRVTL VAAIQLRDPS RRYEAVGAPM IAVVQSARML
701: GAAGLSGGRF KVRSLHVGGV QTRCLSGVGG SASWRAERQK LTAMQWTLAH GPGRAAKRVQ TPPSSRAARV RQQQRRPDVV WSLSSRVLAG MWLKTVRNPD
801: VKISAAGST
101: KPVRALSRIG KRRAGCLFSI EVAAVRGVPA SMDGLRLAVS VRKAETKDGA MQTMPARVSH DGTAEFDETL FVKCNLYFTG GPGTGKPLKL EPRRFVLSVV
201: PVEVPDIRLG TYTVDVSSLV LDSLQKSSEG RRVRWFDRAF GLAGKAAGGE LLLKLGFQLM EDAGLRLYTQ AAGRSSRDVS VSPSRARVHN KNSFSVASTT
301: PKLSTSDGAI SPSMRAYRQL VDRLNIDKRP EDDELSTASG AGDVDYVIPE YEVVDKGVET VKEVVHFQDQ RDVLRELDSI GEQIEAIEAL MASGGKKSPT
401: GAGQQPRLDA DEEMVTVEFL RKLEAVDDDK FRKLKQPMTP RSSESQKKAP VVPDLGQSLG PAVQTRDGGF LVSMNPYNVP LASRDVPPVL AMQVSRPFVL
501: PSAMAATGFD VLQKMAAAGG PDEVRDKVAS LGRMESLTGK TPEQVGFEGI AEAVIGGRRT EGGASSSAAR SVRLVRKLAT ALSEGRMERV ATGIWSAGND
601: PETLDEVLAF SLQKLEAMAV DALMIQAEMA DEEPPFEVAP AAGETNVFDA LVPSDEWSES RGGSDGRVTL VAAIQLRDPS RRYEAVGAPM IAVVQSARML
701: GAAGLSGGRF KVRSLHVGGV QTRCLSGVGG SASWRAERQK LTAMQWTLAH GPGRAAKRVQ TPPSSRAARV RQQQRRPDVV WSLSSRVLAG MWLKTVRNPD
801: VKISAAGST
001: MAGEYSGSRS SNTQLLAELE ALSENLYQKP QVSVGNRRTN SLALPRSSVP SLVTSADEVS TARAEDLTVS KPRARRLSLS PWRSRPKLEV EEEENVTQSN
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
Arabidopsis Description
PMI1Protein PLASTID MOVEMENT IMPAIRED 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.