Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P02110_001 | Banana | extracellular | 59.18 | 57.78 |
| GSMUA_Achr11P... | Banana | extracellular | 49.62 | 47.74 |
| Bra034930.1-P | Field mustard | cytosol | 32.17 | 35.1 |
| VIT_18s0122g00830.t01 | Wine grape | nucleus | 45.68 | 35.04 |
| KRH09253 | Soybean | cytosol | 45.37 | 34.73 |
| KRH60483 | Soybean | nucleus | 44.46 | 34.27 |
| KRH38751 | Soybean | cytosol | 44.01 | 33.8 |
| KRH41783 | Soybean | nucleus | 44.92 | 33.71 |
| CDY35798 | Canola | cytosol | 40.67 | 33.13 |
| Solyc10g006330.2.1 | Tomato | cytosol, nucleus | 44.31 | 33.07 |
| PGSC0003DMT400037294 | Potato | cytosol | 43.85 | 32.62 |
| CDX80727 | Canola | cytosol | 39.76 | 32.51 |
| Bra034929.1-P | Field mustard | cytosol | 40.82 | 32.37 |
| TraesCS1D01G204800.1 | Wheat | cytosol | 39.61 | 32.26 |
| TraesCS1A01G201400.1 | Wheat | cytosol | 39.3 | 31.86 |
| TraesCS1B01G215700.1 | Wheat | cytosol | 39.15 | 31.85 |
| HORVU1Hr1G052010.1 | Barley | cytosol | 39.0 | 31.65 |
| Os10t0539700-01 | Rice | cytosol, plasma membrane | 39.91 | 31.61 |
| AT1G42550.1 | Thale cress | nucleus | 40.21 | 31.44 |
| Zm00001d029761_P001 | Maize | cytosol | 38.85 | 30.48 |
| EER94579 | Sorghum | cytosol, nucleus, plastid | 38.85 | 29.73 |
| GSMUA_Achr1P05230_001 | Banana | nucleus | 24.58 | 14.79 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P11690_001 | EnsemblPlants:GSMUA_Achr5T11690_001 | EnsemblPlantsGene:GSMUA_Achr5G11690_001 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0008150 |
| GO:GO:0009902 | GO:GO:0009987 | GO:GO:0016043 | InterPro:IPR019448 | InterPro:NT-C2 | InterPro:PMI1 |
| PANTHER:PTHR33414 | PANTHER:PTHR33414:SF2 | PFAM:PF10358 | PFscan:PS51840 | SEG:seg | UniParc:UPI000295DB98 |
| UniProt:M0SXP8 | MapMan:20.5.5 | : | : | : | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G11690_001]
Coordinates
chr5:+:8423368..8425551
Molecular Weight (calculated)
72300.5 Da
IEP (calculated)
6.454
GRAVY (calculated)
-0.355
Length
659 amino acids
Sequence
(BLAST)
(BLAST)
001: MHRLLCLFSV EVIAIHHLPV SVDGLRLSVV VRKKETRDGA VKTMPSRALQ GTADFQETLF IPSHLYCSGG AGTGKPLKLE SRLFLISTVA VDAPQLDLGT
101: SIVDLSLMVK ESIQKNLEGQ RIRQWGKDFP LSGKAKGGEM VLKLAFQIMD DGGFGIYNQA ETIRTNREKD PDFVVSWKQP RSSFSDANPR TMIEDPSLIP
201: SDDNTSMRRS AATDELALQG HDLNPPVTPV LQKTKSDRLE VGDDLPNYEA SVSSEVVKQV VHRRAQQRRL KELRPVTREF EALDSVVTED VVGLAKTTQE
301: HKLQRLDPEE EAVIKEFLRL LEFEDSEGSK CDVVDLITCS NLGSKEDARN DGESVLLSDL GKSLGPVVQT RNGGYLASMN PCNVPAPRKE TPKLAMQISR
401: ELILEEKNLE SEFEVFRKLA AMGSEKMGSK ILSLTAMDEL FGKTAGQIAI EGVASAIISG RNKEGASSSA ARTITTAMAV DALKIQVEMT EEEEAHFDAA
501: PLMESNDSSN PLESAISPED WSRACSAKDN VMMLVVVQLR DPSRSYEAVG APMMVVVKAV ASDDGQGNND RRFKLMSLHV GGLKLSSNRK RSVGDGEKQR
601: STAMQWLAEN GLAKAGRRTK RTQAKRGQDV VWSISSRCSA GIWLLPVRNP NVKVLSNNL
101: SIVDLSLMVK ESIQKNLEGQ RIRQWGKDFP LSGKAKGGEM VLKLAFQIMD DGGFGIYNQA ETIRTNREKD PDFVVSWKQP RSSFSDANPR TMIEDPSLIP
201: SDDNTSMRRS AATDELALQG HDLNPPVTPV LQKTKSDRLE VGDDLPNYEA SVSSEVVKQV VHRRAQQRRL KELRPVTREF EALDSVVTED VVGLAKTTQE
301: HKLQRLDPEE EAVIKEFLRL LEFEDSEGSK CDVVDLITCS NLGSKEDARN DGESVLLSDL GKSLGPVVQT RNGGYLASMN PCNVPAPRKE TPKLAMQISR
401: ELILEEKNLE SEFEVFRKLA AMGSEKMGSK ILSLTAMDEL FGKTAGQIAI EGVASAIISG RNKEGASSSA ARTITTAMAV DALKIQVEMT EEEEAHFDAA
501: PLMESNDSSN PLESAISPED WSRACSAKDN VMMLVVVQLR DPSRSYEAVG APMMVVVKAV ASDDGQGNND RRFKLMSLHV GGLKLSSNRK RSVGDGEKQR
601: STAMQWLAEN GLAKAGRRTK RTQAKRGQDV VWSISSRCSA GIWLLPVRNP NVKVLSNNL
001: MAGEYSGSRS SNTQLLAELE ALSENLYQKP QVSVGNRRTN SLALPRSSVP SLVTSADEVS TARAEDLTVS KPRARRLSLS PWRSRPKLEV EEEENVTQSN
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
Arabidopsis Description
PMI1Protein PLASTID MOVEMENT IMPAIRED 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.