Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- plastid 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G215700.1 | Wheat | cytosol | 93.23 | 93.58 |
| TraesCS1D01G204800.1 | Wheat | cytosol | 91.39 | 91.84 |
| HORVU1Hr1G052010.1 | Barley | cytosol | 91.39 | 91.5 |
| Os10t0539700-01 | Rice | cytosol, plasma membrane | 71.59 | 69.95 |
| Zm00001d029761_P001 | Maize | cytosol | 67.4 | 65.24 |
| EER94579 | Sorghum | cytosol, nucleus, plastid | 67.77 | 64.0 |
| GSMUA_Achr5P11690_001 | Banana | endoplasmic reticulum, golgi | 31.86 | 39.3 |
| GSMUA_Achr1P02110_001 | Banana | extracellular | 32.23 | 38.81 |
| VIT_18s0122g00830.t01 | Wine grape | nucleus | 40.84 | 38.65 |
| Bra034930.1-P | Field mustard | cytosol | 28.54 | 38.41 |
| CDY35798 | Canola | cytosol | 37.88 | 38.07 |
| TraesCS5A01G355000.1 | Wheat | cytosol | 40.71 | 37.87 |
| CDX80727 | Canola | cytosol | 37.39 | 37.72 |
| KRH60483 | Soybean | nucleus | 39.36 | 37.43 |
| Bra034929.1-P | Field mustard | cytosol | 38.13 | 37.3 |
| KRH38751 | Soybean | cytosol | 38.99 | 36.95 |
| KRH09253 | Soybean | cytosol | 39.11 | 36.93 |
| Solyc10g006330.2.1 | Tomato | cytosol, nucleus | 40.1 | 36.92 |
| PGSC0003DMT400037294 | Potato | cytosol | 40.1 | 36.79 |
| AT1G42550.1 | Thale cress | nucleus | 38.13 | 36.77 |
| KRH41783 | Soybean | nucleus | 38.87 | 35.99 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G201400.1 | EnsemblPlantsGene:TraesCS1A01G201400 | InterPro:IPR019448 | InterPro:NT-C2 | PANTHER:PTHR33414 | PANTHER:PTHR33414:SF3 |
| PFAM:PF10358 | PFscan:PS51840 | SEG:seg | MapMan:20.5.5 | : | : |
Description
No Description!
Coordinates
chr1A:+:362403114..362405555
Molecular Weight (calculated)
86998.6 Da
IEP (calculated)
10.127
GRAVY (calculated)
-0.331
Length
813 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLGGGGGL SDYLDRPNAI HRRTASLAIA RSGDDGPRIM DGVGREGRRA RSSRRLSLSS WLGPRSRPLP VPADDTTSVE STSREFEGSG SAKGKPSAWS
101: SWKPVRALSR IGKRRAGCLF SIEVAAVRGV PASMDGLRLA VSVRKAETKD GAMQTMPARV SHDGTAEFDE TLFVKCNLYF TGGPGTGKPL KLEPRRFVVS
201: VVPVEVPDIR LGTYTVDVSS LVLDSLQKSS EGRRVRWFDR AFGLAGKATG GELLLKLGFQ VMEDAGLRLY TQAAGRSSRD VSVSPSRARV HNKNSFSVAS
301: TTPKLSTSDG AISPSMRAYR QLVDRLNIDK RPDDDELSTA SGAGAGDVDY AIPEYEVVDK GVETVKEVVH FQDQRDVLRE LDSIGEQIEA IEALMASGGK
401: KSPGGAGQQP RLDADEEMVT VEFLRKLEAV DDDKFRKLKQ PMTPRSSESQ KKSPVVPDLG QSLGPAVQTR DGGFLVSMNP YNVPLASRDV HPVLAMQVSR
501: PFVLPSAMAA TGFDVLQKMA AAGRPDEVRD KVASLGRMES LTGKTPEQVG FEGIAEAVIG GRRTEGGASS SAARSVRLVR KLATALSEGR MERVATGIWS
601: AGNDPETLDE VLAFSLQKLE AMAVDALMIQ AEMADEEPPF EVAPAAGDAN VFDALVPSDE WSESRGGSDG RVTLVAAIQL RDPSRRYEAV GAPMIAVVQS
701: ARMLGAAGLS GGRFKVRSLH VGGVQTRCLS GVGGSASWRA ERQKLTAMQW TLAHGPGRAA KRAQTPPSSQ AARVRQQRRR PDVVWSLSSR VLAGMWLKTV
801: RNPDVKISAA GST
101: SWKPVRALSR IGKRRAGCLF SIEVAAVRGV PASMDGLRLA VSVRKAETKD GAMQTMPARV SHDGTAEFDE TLFVKCNLYF TGGPGTGKPL KLEPRRFVVS
201: VVPVEVPDIR LGTYTVDVSS LVLDSLQKSS EGRRVRWFDR AFGLAGKATG GELLLKLGFQ VMEDAGLRLY TQAAGRSSRD VSVSPSRARV HNKNSFSVAS
301: TTPKLSTSDG AISPSMRAYR QLVDRLNIDK RPDDDELSTA SGAGAGDVDY AIPEYEVVDK GVETVKEVVH FQDQRDVLRE LDSIGEQIEA IEALMASGGK
401: KSPGGAGQQP RLDADEEMVT VEFLRKLEAV DDDKFRKLKQ PMTPRSSESQ KKSPVVPDLG QSLGPAVQTR DGGFLVSMNP YNVPLASRDV HPVLAMQVSR
501: PFVLPSAMAA TGFDVLQKMA AAGRPDEVRD KVASLGRMES LTGKTPEQVG FEGIAEAVIG GRRTEGGASS SAARSVRLVR KLATALSEGR MERVATGIWS
601: AGNDPETLDE VLAFSLQKLE AMAVDALMIQ AEMADEEPPF EVAPAAGDAN VFDALVPSDE WSESRGGSDG RVTLVAAIQL RDPSRRYEAV GAPMIAVVQS
701: ARMLGAAGLS GGRFKVRSLH VGGVQTRCLS GVGGSASWRA ERQKLTAMQW TLAHGPGRAA KRAQTPPSSQ AARVRQQRRR PDVVWSLSSR VLAGMWLKTV
801: RNPDVKISAA GST
001: MAGEYSGSRS SNTQLLAELE ALSENLYQKP QVSVGNRRTN SLALPRSSVP SLVTSADEVS TARAEDLTVS KPRARRLSLS PWRSRPKLEV EEEENVTQSN
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
101: RIVKKPEESS SGSGVKEEKK GIWNWKPIRG LVRIGMQKLS CLLSVEVVAA QNLPASMNGL RLGVCVRKKE TKDGAVQTMP CRVSQGSADF EETLFIKCHV
201: YYSPANGKGS PAKFEARPFL FYLFAVDAKE LEFGRHVVDL SELIQESVEK MNYEGARVRQ WDMNWGLSGK AKGGELALKL GFQIMEKDGG AGIYSKQGEF
301: GMKPSSKPKN FANSFGRKQS KTSFSVPSPK MTSRSEAWTP ASGVESVSDF HGMEHLNLDE PEEKPEEKPV QKNDKPEQRA EDDQEEPDFE VVDKGVEFDD
401: DLETEKSDGT IGERSVEMKE QHVNVDDPRH IMRLTELDSI AKQIKALESM MKDESDGGDG ETESQRLDEE EQTVTKEFLQ LLEDEETEKL KFYQHKMDIS
501: ELRSGESVDD ESENYLSDLG KGIGCVVQTR DGGYLVSMNP FDTVVMRKDT PKLVMQISKQ IVVLPEAGPA TGFELFHRMA GSGEELESKI SSLMAIDELM
601: GKTGEQVAFE GIASAIIQGR NKERANTSAA RTVAAVKTMA NAMSSGRRER IMTGIWNVEE NPLTSAEEVL AVSLQKLEEM VVEGLKIQAD MVDDEAPFEV
701: SAAKGQKNPL ESTIPLEEWQ KEHRTQQKLT VLATVQLRDP TRRYEAVGGT VVVAVQAEEE EEKGLKVGSL HIGGVKKDAA EKRRLTAAQW LVEHGMGKKG
801: KKKSNIKKKE KEEEEEEMLW SLSSRVMADM WLKSIRNPDV KLH
Arabidopsis Description
PMI1Protein PLASTID MOVEMENT IMPAIRED 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.