Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04497 | Canola | nucleus | 89.59 | 90.83 |
| GSMUA_Achr8P07750_001 | Banana | cytosol | 38.01 | 59.15 |
| KRH30420 | Soybean | nucleus | 38.91 | 53.42 |
| KRH25243 | Soybean | nucleus | 34.39 | 50.33 |
| Os09t0568200-01 | Rice | nucleus | 31.22 | 49.29 |
| AT2G27470.1 | Thale cress | nucleus | 58.37 | 46.91 |
| VIT_06s0080g00460.t01 | Wine grape | nucleus | 40.72 | 46.63 |
| PGSC0003DMT400067767 | Potato | nucleus | 35.75 | 45.93 |
| Solyc11g068480.1.1 | Tomato | nucleus | 35.75 | 45.14 |
| EER98514 | Sorghum | nucleus | 33.03 | 41.95 |
| Zm00001d019865_P001 | Maize | nucleus | 33.03 | 41.71 |
| TraesCS4A01G306400.1 | Wheat | nucleus | 32.13 | 32.57 |
| HORVU4Hr1G001140.1 | Barley | nucleus | 32.13 | 29.71 |
| TraesCS4D01G007000.1 | Wheat | nucleus | 32.13 | 28.17 |
| TraesCS4B01G008300.1 | Wheat | nucleus | 31.67 | 27.34 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:13.2.3.3.3 | EnsemblPlantsGene:Bra012016 | EnsemblPlants:Bra012016.1 | EnsemblPlants:Bra012016.1-P | InterPro:CBFA_NFYB_domain |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046982 | InterPro:Histone-fold | InterPro:IPR009072 | UniProt:M4D6A7 |
| PFAM:PF00808 | PANTHER:PTHR11064 | PANTHER:PTHR11064:SF81 | SUPFAM:SSF47113 | UniParc:UPI00025418CA | SEG:seg |
Description
AT2G27470 (E=3e-045) NF-YB11 | NF-YB11 (NUCLEAR FACTOR Y, SUBUNIT B11); transcription factor
Coordinates
chrA07:-:10592805..10593808
Molecular Weight (calculated)
24486.2 Da
IEP (calculated)
4.005
GRAVY (calculated)
-1.312
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSEKAVVDE LPLAIVRRVV KDKLSECSPD YDVSIHKEAL LAFSESARIF IHYLSATAND ICKDSRRQTM KAEDVFKALE DMEFSEFLEP LKASLDDFKK
101: KNAGKKAASG SGAAAASKPK ETKKRKHEEA STQKGVGKSK RDEGDLKNDE DDNTKENEDD NTEENGNDEE EEEEDANGNE ENSMEEIENE DNSMEEAGSG
201: SGEDDENEGS GEEEEGDDED E
101: KNAGKKAASG SGAAAASKPK ETKKRKHEEA STQKGVGKSK RDEGDLKNDE DDNTKENEDD NTEENGNDEE EEEEDANGNE ENSMEEIENE DNSMEEAGSG
201: SGEDDENEGS GEEEEGDDED E
001: MESEKVVVDE LPLAIVRRVV KKKLSECSPD YDVSIHKEAL LAFSESARIF IHYLSATAND FCKDARRQTM KADDVFKALE EMDFSEFLEP LKSSLEDFKK
101: KNAGKKAGAA AASYPAGGAA LKSSSGTASK PKETKKRKQE EPSTQKGARK SKIDEETKRN DEETENDNTE EENGNDEEDE NGNDEEDEND DENTEENGND
201: EENDDENTEE NGNDEENEKE DEENSMEENG NESEESGNED HSMEENGSGV GEDNENEDGS VSGSGEEVES DEEDE
101: KNAGKKAGAA AASYPAGGAA LKSSSGTASK PKETKKRKQE EPSTQKGARK SKIDEETKRN DEETENDNTE EENGNDEEDE NGNDEEDEND DENTEENGND
201: EENDDENTEE NGNDEENEKE DEENSMEENG NESEESGNED HSMEENGSGV GEDNENEDGS VSGSGEEVES DEEDE
Arabidopsis Description
NF-YB11Nuclear factor Y, subunit B11 [Source:UniProtKB/TrEMBL;Acc:Q9ZQH2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.