Factsheet for AT2G27470.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX71450	Canola	nucleus	46.91	60.28
CDY04497	Canola	nucleus	47.27	59.63
GSMUA_Achr8P07750_001	Banana	cytosol	30.18	58.45
Bra012016.1-P	Field mustard	nucleus	46.91	58.37
CDY31178	Canola	nucleus	41.82	54.5
KRH30420	Soybean	nucleus	29.45	50.31
KRH25243	Soybean	nucleus	27.27	49.67
Os09t0568200-01	Rice	nucleus	24.36	47.86
VIT_06s0080g00460.t01	Wine grape	nucleus	31.64	45.08
PGSC0003DMT400067767	Potato	nucleus	26.18	41.86
Solyc11g068480.1.1	Tomato	nucleus	26.55	41.71
EER98514	Sorghum	nucleus	25.09	39.66
Zm00001d019865_P001	Maize	nucleus	25.09	39.43
TraesCS4A01G306400.1	Wheat	nucleus	24.36	30.73
HORVU4Hr1G001140.1	Barley	nucleus	24.36	28.03
TraesCS4D01G007000.1	Wheat	nucleus	24.36	26.59
TraesCS4B01G008300.1	Wheat	nucleus	23.64	25.39

Protein Annotations

Gene3D:1.10.20.10	MapMan:13.2.3.3.3	EntrezGene:817292	ProteinID:AAD15599.1	ProteinID:AEC08000.1	ArrayExpress:AT2G27470
EnsemblPlantsGene:AT2G27470	RefSeq:AT2G27470	TAIR:AT2G27470	RefSeq:AT2G27470-TAIR-G	EnsemblPlants:AT2G27470.1	TAIR:AT2G27470.1
Unigene:At.48523	EMBL:BT004083	InterPro:CBFA_NFYB_domain	ncoils:Coil	GO:GO:0003674	GO:GO:0003700
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0046982	InterPro:Histone-fold	InterPro:IPR009072	Symbol:NF-YB11	RefSeq:NP_180316.1	PFAM:PF00808
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PANTHER:PTHR11064
PANTHER:PTHR11064:SF81	UniProt:Q9ZQH2	SUPFAM:SSF47113	UniParc:UPI000000C26F	SEG:seg	:

Description

NF-YB11Nuclear factor Y, subunit B11 [Source:UniProtKB/TrEMBL;Acc:Q9ZQH2]

Coordinates

chr2:-:11744981..11746455

Molecular Weight (calculated)

30551.3 Da

IEP (calculated)

3.890

GRAVY (calculated)

-1.504

Length

275 amino acids

Sequence
(BLAST)

001: MESEKVVVDE LPLAIVRRVV KKKLSECSPD YDVSIHKEAL LAFSESARIF IHYLSATAND FCKDARRQTM KADDVFKALE EMDFSEFLEP LKSSLEDFKK
101: KNAGKKAGAA AASYPAGGAA LKSSSGTASK PKETKKRKQE EPSTQKGARK SKIDEETKRN DEETENDNTE EENGNDEEDE NGNDEEDEND DENTEENGND
201: EENDDENTEE NGNDEENEKE DEENSMEENG NESEESGNED HSMEENGSGV GEDNENEDGS VSGSGEEVES DEEDE

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.