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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • nucleus 2
  • plastid 2
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY68756 Canola endoplasmic reticulum 96.69 96.69
Bra024902.1-P Field mustard endoplasmic reticulum, vacuole 80.13 80.13
Bra017465.1-P Field mustard endoplasmic reticulum, vacuole 71.52 72.97
AT2G01150.2 Thale cress plastid 65.56 50.51
Bra026165.1-P Field mustard extracellular 41.72 46.32
Solyc04g007500.1.1 Tomato endoplasmic reticulum, extracellular 45.7 42.33
PGSC0003DMT400015306 Potato endoplasmic reticulum, extracellular 45.7 41.57
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane 43.71 40.74
Solyc05g008640.1.1 Tomato cytosol 43.71 38.6
PGSC0003DMT400078399 Potato cytosol 43.05 38.46
KRH35862 Soybean endoplasmic reticulum, extracellular 42.38 37.87
KRG90922 Soybean endoplasmic reticulum, extracellular 35.76 35.76
Protein Annotations
EnsemblPlants:Bra014339.1EnsemblPlants:Bra014339.1-PEnsemblPlantsGene:Bra014339Gene3D:3.30.40.10InterPro:IPR001841InterPro:IPR013083
InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDPANTHER:PTHR14155PANTHER:PTHR14155:SF410PFAM:PF13639PFscan:PS50089
SEG:segSMART:SM00184SUPFAM:SSF57850UniParc:UPI0002545BCFUniProt:M4DCX2MapMan:11.1.2.4
Description
AT1G15100 (E=2e-037) RHA2A | RHA2A; protein binding / ubiquitin-protein ligase/ zinc ion binding
Coordinates
chrA08:+:1507303..1507758
Molecular Weight (calculated)
16270.6 Da
IEP (calculated)
6.885
GRAVY (calculated)
0.248
Length
151 amino acids
Sequence
(BLAST)
001: MGLQGQLSDV SSDSIPLMLV ALLATLFKHV RSFFLRFSSS FSAVEEVASP SVSSGLADLA VLADQLKLNR IFSYPYADTA AASDCIVCLS TLKSGEEVRK
101: LGCRHVFHKQ CLEGWLQHLN FKCPLCRSPL LGRGGGCESV SLLSEEATAS Q
Best Arabidopsis Sequence Match ( AT2G01150.3 )
(BLAST)
001: MRCKVVYAAR TTTRTKVTKT ISKTISMGLQ GQLSDVSSDS IPLMLLALLA TFFRHVRSLL LFPSSAPVVV VTSNLSVLAD QLNLNRLFSY RYSDNAASDC
101: IVCLSKLKTG EEVRKLDCRH VFHKQCLEGW LQHLNFNCPL CRSPLLPHHH QGHGSDASIS AFPLRSTSTA SSH
Arabidopsis Description
RHA2BRING-H2 finger protein 2B [Source:TAIR;Acc:AT2G01150]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.