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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:
  • nucleus 2
  • plastid 2
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, vacuole
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY17693 Canola endoplasmic reticulum, vacuole 97.35 97.35
Bra014339.1-P Field mustard endoplasmic reticulum, extracellular 80.13 80.13
Bra017465.1-P Field mustard endoplasmic reticulum, vacuole 71.52 72.97
AT2G01150.2 Thale cress plastid 68.87 53.06
Bra026165.1-P Field mustard extracellular 45.7 50.74
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane 45.7 42.59
Solyc04g007500.1.1 Tomato endoplasmic reticulum, extracellular 45.7 42.33
PGSC0003DMT400015306 Potato endoplasmic reticulum, extracellular 45.7 41.57
KRH35862 Soybean endoplasmic reticulum, extracellular 44.37 39.65
PGSC0003DMT400078399 Potato cytosol 43.71 39.05
Solyc05g008640.1.1 Tomato cytosol 43.05 38.01
KRG90922 Soybean endoplasmic reticulum, extracellular 37.75 37.75
Protein Annotations
EnsemblPlants:Bra024902.1EnsemblPlants:Bra024902.1-PEnsemblPlantsGene:Bra024902Gene3D:3.30.40.10InterPro:IPR001841InterPro:IPR013083
InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDPANTHER:PTHR14155PANTHER:PTHR14155:SF410PFAM:PF13639PFscan:PS50089
SEG:segSMART:SM00184SUPFAM:SSF57850UniParc:UPI0001ED1081UniProt:M4E7Z6MapMan:11.1.2.4
Description
AT1G15100 (E=2e-042) RHA2A | RHA2A; protein binding / ubiquitin-protein ligase/ zinc ion binding
Coordinates
chrA06:-:24194386..24194841
Molecular Weight (calculated)
16415.6 Da
IEP (calculated)
7.203
GRAVY (calculated)
0.111
Length
151 amino acids
Sequence
(BLAST)
001: MGLQGQLSDV SSDSIPLMLV ALLATLFKHV RSFFLRFSAS NPHLSVVDEA AASASVTSGL ANLAVLADQL KLNRLFSYSY VDNAASDCIV CLSTLKTGEE
101: VRKLDCRHVF HKHCLEGWLQ HLNFNCPLCR STLLARGHGE GEQSSQATAS H
Best Arabidopsis Sequence Match ( AT2G01150.3 )
(BLAST)
001: MRCKVVYAAR TTTRTKVTKT ISKTISMGLQ GQLSDVSSDS IPLMLLALLA TFFRHVRSLL LFPSSAPVVV VTSNLSVLAD QLNLNRLFSY RYSDNAASDC
101: IVCLSKLKTG EEVRKLDCRH VFHKQCLEGW LQHLNFNCPL CRSPLLPHHH QGHGSDASIS AFPLRSTSTA SSH
Arabidopsis Description
RHA2BRING-H2 finger protein 2B [Source:TAIR;Acc:AT2G01150]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.