Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93428 | Canola | golgi, nucleus, peroxisome | 90.5 | 73.49 |
| VIT_01s0026g01170.t01 | Wine grape | cytosol, mitochondrion | 31.16 | 57.69 |
| AT1G10417.4 | Thale cress | golgi | 71.51 | 54.65 |
| KRH74731 | Soybean | mitochondrion | 39.76 | 42.01 |
| KRH69412 | Soybean | mitochondrion | 39.47 | 41.82 |
| Os10t0411750-01 | Rice | cytosol, mitochondrion, nucleus | 9.5 | 29.36 |
| GSMUA_Achr6P01470_001 | Banana | endoplasmic reticulum, extracellular, nucleus | 20.77 | 27.89 |
| TraesCS7A01G231800.1 | Wheat | nucleus | 26.11 | 22.34 |
| TraesCSU01G104600.1 | Wheat | nucleus | 25.52 | 21.72 |
| TraesCS7B01G130300.1 | Wheat | nucleus | 25.22 | 21.57 |
| KXG38555 | Sorghum | cytosol | 24.93 | 21.16 |
| Zm00001d014189_P003 | Maize | cytosol, extracellular, nucleus | 5.34 | 10.4 |
Protein Annotations
Description
AT1G10417 (E=8e-059) | Encodes protein with unknown function whose expression is repressed by inoculation with Agrobacterium tumerifaciens.
Coordinates
chrA06:-:3611402..3614024
Molecular Weight (calculated)
38826.7 Da
IEP (calculated)
6.199
GRAVY (calculated)
-0.700
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MELLKLSKFK LQLQSMIGEV RDLRERERSV TDHSNLINQK QKQTEEECSR KVHELESELA SSRETQEALE RKVSYLQNDY SLLENKQSEL KNTIQNLLQS
101: RESFLNAYQE SFSEMRCSVE ARDRKIAILH QKITSHLALF DSIEKEASAI KNVIQEVQGL VDQKEDPYFQ KTLKVKDLVV ENLVSEKEAL YSEVRSLEMI
201: LLRIQESVTL MTEEDRRVFT SILTLEQGAH ERNNYSRYND TVDKTEELAC EAPIVGSQEN SVNVISSASP RCPHQNTGCS LVQDADHRLN SAQSLQHNTV
301: SGHRQSTNNN DHFDTKASKK KRFSICFLLT VTVRTWS
101: RESFLNAYQE SFSEMRCSVE ARDRKIAILH QKITSHLALF DSIEKEASAI KNVIQEVQGL VDQKEDPYFQ KTLKVKDLVV ENLVSEKEAL YSEVRSLEMI
201: LLRIQESVTL MTEEDRRVFT SILTLEQGAH ERNNYSRYND TVDKTEELAC EAPIVGSQEN SVNVISSASP RCPHQNTGCS LVQDADHRLN SAQSLQHNTV
301: SGHRQSTNNN DHFDTKASKK KRFSICFLLT VTVRTWS
001: MEMLKLSKFK LQLQSMIGEV RDLRVRRKRF LYIYGLCIFF APPVSLFFFF VFFHFTTGVF AGKGAISHRS HYSCESGSSI NKQKQTEEDC IRKVQELQAD
101: LASSRETQEA LERKVSYLQN DYSLLENKQS ELKTTIQNLL QSRESFLNAY QESFCEMKCS IEARDRKILM LHEKITSHLT LFDSIEKEAS VIKKVIHEVQ
201: GLVDKKEDVV TGLKEKMDHV STYEKVFIEN IRALEEKLKC HETELQSKDN IISELSAQLE SEKSKNEHQH QVEELQKTLQ VKDLAVENLI SEKEALYSEM
301: KGLEMILQRI QESVSLMTEE DRKVFTSILT FEQGSDERNK RSRHNDTVDK MEELLYVAPV MHSQENSVKV IPSASPRCQH QKTDCRSIQD DDHQLDSAEY
401: LQHNTVSGHW QSTNNHNHFE LEAIQRVDEP A
101: LASSRETQEA LERKVSYLQN DYSLLENKQS ELKTTIQNLL QSRESFLNAY QESFCEMKCS IEARDRKILM LHEKITSHLT LFDSIEKEAS VIKKVIHEVQ
201: GLVDKKEDVV TGLKEKMDHV STYEKVFIEN IRALEEKLKC HETELQSKDN IISELSAQLE SEKSKNEHQH QVEELQKTLQ VKDLAVENLI SEKEALYSEM
301: KGLEMILQRI QESVSLMTEE DRKVFTSILT FEQGSDERNK RSRHNDTVDK MEELLYVAPV MHSQENSVKV IPSASPRCQH QKTDCRSIQD DDHQLDSAEY
401: LQHNTVSGHW QSTNNHNHFE LEAIQRVDEP A
Arabidopsis Description
Encodes protein with unknown function whose expression is repressed by inoculation with Agrobacterium tumerifaciens. [Source:TAIR;Acc:AT1G10417]
SUBAcon: [mitochondrion,golgi,extracellular,nucleus]
SUBAcon: [mitochondrion,golgi,extracellular,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.