Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G130300.1 | Wheat | nucleus | 96.72 | 97.21 |
| TraesCS7A01G231800.1 | Wheat | nucleus | 96.46 | 96.95 |
| Os10t0411750-01 | Rice | cytosol, mitochondrion, nucleus | 17.68 | 64.22 |
| KXG38555 | Sorghum | cytosol | 60.86 | 60.71 |
| VIT_01s0026g01170.t01 | Wine grape | cytosol, mitochondrion | 17.93 | 39.01 |
| KRH69412 | Soybean | mitochondrion | 29.29 | 36.48 |
| KRH74731 | Soybean | mitochondrion | 28.79 | 35.74 |
| GSMUA_Achr6P01470_001 | Banana | endoplasmic reticulum, extracellular, nucleus | 22.47 | 35.46 |
| Zm00001d014189_P003 | Maize | cytosol, extracellular, nucleus | 15.15 | 34.68 |
| AT1G10417.4 | Thale cress | golgi | 29.8 | 26.76 |
| CDX93428 | Canola | golgi, nucleus, peroxisome | 27.02 | 25.78 |
| CDY37980 | Canola | nucleus, peroxisome, vacuole | 29.04 | 25.73 |
| Bra019936.1-P | Field mustard | nucleus | 21.72 | 25.52 |
Protein Annotations
| EnsemblPlants:TraesCSU01G104600.1 | EnsemblPlantsGene:TraesCSU01G104600 | ncoils:Coil | SEG:seg | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrUn:+:92260193..92263696
Molecular Weight (calculated)
44980.1 Da
IEP (calculated)
4.623
GRAVY (calculated)
-0.672
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAEAEAAAL SQLQLQLLAL VSDLRLTRER ERAAREELHA SSERWKAAEE ERRREARELR AESAARDDAL QRLESRVKCL ENENELLERN EKDLKENIER
101: LLQSREAFMR QYEDSACSLQ WTIQMRDKQI TVISEKLNSH LALFNSVGKE VAAVKQVLGD VECLVGEKEN VVSDLKCKVQ RISVLEKDFV EKLSFLGDKI
201: TSYQLELRNR ARIIYGLKEQ LDAEKLKNNF HPQLEELKKS LLVKDEIIER LISDKQEMLV ELHNMETALQ KFQNIFSRLG HEEMKSSLPV SESQDCKVNS
301: IPGSQVDLPN EESMIPIIGE TANANVECKS GIDTGSNQVQ SPPSLKHYAL PCSEPVTANV EKSECPPESE DVEMGNSSPE QQTHSANPDP EIENQS
101: LLQSREAFMR QYEDSACSLQ WTIQMRDKQI TVISEKLNSH LALFNSVGKE VAAVKQVLGD VECLVGEKEN VVSDLKCKVQ RISVLEKDFV EKLSFLGDKI
201: TSYQLELRNR ARIIYGLKEQ LDAEKLKNNF HPQLEELKKS LLVKDEIIER LISDKQEMLV ELHNMETALQ KFQNIFSRLG HEEMKSSLPV SESQDCKVNS
301: IPGSQVDLPN EESMIPIIGE TANANVECKS GIDTGSNQVQ SPPSLKHYAL PCSEPVTANV EKSECPPESE DVEMGNSSPE QQTHSANPDP EIENQS
001: MEMLKLSKFK LQLQSMIGEV RDLRERERSV TDHITLANQK QKQTEEDCIR KVQELQADLA SSRETQEALE RKVSYLQNDY SLLENKQSEL KTTIQNLLQS
101: RESFLNAYQE SFCEMKCSIE ARDRKILMLH EKITSHLTLF DSIEKEASVI KKVIHEVQGL VDKKEDVVTG LKEKMDHVST YEKVFIENIR ALEEKLKCHE
201: TELQSKDNII SELSAQLESE KSKNEHQHQV EELQKTLQVK DLAVENLISE KEALYSEMKG LEMILQRIQE SVSLMTEEDR KVFTSILTFE QGSDERNKRS
301: RSIKSLFKLF MSLY
101: RESFLNAYQE SFCEMKCSIE ARDRKILMLH EKITSHLTLF DSIEKEASVI KKVIHEVQGL VDKKEDVVTG LKEKMDHVST YEKVFIENIR ALEEKLKCHE
201: TELQSKDNII SELSAQLESE KSKNEHQHQV EELQKTLQVK DLAVENLISE KEALYSEMKG LEMILQRIQE SVSLMTEEDR KVFTSILTFE QGSDERNKRS
301: RSIKSLFKLF MSLY
Arabidopsis Description
Encodes protein with unknown function whose expression is repressed by inoculation with Agrobacterium tumerifaciens. [Source:TAIR;Acc:AT1G10417]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.