Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0026g01170.t01 | Wine grape | cytosol, mitochondrion | 33.03 | 19.78 |
| KXG38555 | Sorghum | cytosol | 66.97 | 18.39 |
| TraesCS7B01G130300.1 | Wheat | nucleus | 64.22 | 17.77 |
| TraesCSU01G104600.1 | Wheat | nucleus | 64.22 | 17.68 |
| TraesCS7A01G231800.1 | Wheat | nucleus | 63.3 | 17.51 |
| KRH69412 | Soybean | mitochondrion | 34.86 | 11.95 |
| KRH74731 | Soybean | mitochondrion | 33.95 | 11.6 |
| GSMUA_Achr6P01470_001 | Banana | endoplasmic reticulum, extracellular, nucleus | 24.77 | 10.76 |
| Bra019936.1-P | Field mustard | nucleus | 29.36 | 9.5 |
| CDX93428 | Canola | golgi, nucleus, peroxisome | 30.28 | 7.95 |
| CDY37980 | Canola | nucleus, peroxisome, vacuole | 30.28 | 7.38 |
| AT1G10417.4 | Thale cress | golgi | 26.61 | 6.58 |
| Zm00001d014189_P003 | Maize | cytosol, extracellular, nucleus | 0.92 | 0.58 |
Protein Annotations
| EnsemblPlants:Os10t0411750-01 | EnsemblPlantsGene:Os10g0411750 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | ncoils:Coil | ProteinID:BAT10816.1 |
| SEG:seg | UniParc:UPI0003939D0E | UniProt:A0A0P0XUG6 | MapMan:35.2 | : | : |
Description
Hypothetical conserved gene. (Os10t0411750-01)
Coordinates
chr10:-:14326673..14330476
Molecular Weight (calculated)
12910.0 Da
IEP (calculated)
4.941
GRAVY (calculated)
-1.081
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: FLFHFTVSQE RERAAREELH AASQRWKEAE EGHRRETREL RAEVAARDDA LRRLESRIKC LENENEQLEK NEKELKDNME GLLQSKEAFI KHYEAGLCLF
101: SAMDYPDEG
101: SAMDYPDEG
001: MDCVSSSLHQ FLSSSSSSSS TLLPAFLQER ERSVTDHITL ANQKQKQTEE DCIRKVQELQ ADLASSRETQ EALERKVSYL QNDYSLLENK QSELKTTIQN
101: LLQSRESFLN AYQESFCEMK CSIEARDRKI LMLHEKITSH LTLFDSIEKE ASVIKKVIHE VQGLVDKKED VVTGLKEKMD HVSTYEKVFI ENIRALEEKL
201: KCHETELQSK DNIISELSAQ LESEKSKNEH QHQVEELQKT LQVKDLAVEN LISEKEALYS EMKGLEMILQ RIQESVSLMT EEDRKVFTSI LTFEQGSDER
301: NKRSRSIKSL FKLFMSLY
101: LLQSRESFLN AYQESFCEMK CSIEARDRKI LMLHEKITSH LTLFDSIEKE ASVIKKVIHE VQGLVDKKED VVTGLKEKMD HVSTYEKVFI ENIRALEEKL
201: KCHETELQSK DNIISELSAQ LESEKSKNEH QHQVEELQKT LQVKDLAVEN LISEKEALYS EMKGLEMILQ RIQESVSLMT EEDRKVFTSI LTFEQGSDER
301: NKRSRSIKSL FKLFMSLY
Arabidopsis Description
Encodes protein with unknown function whose expression is repressed by inoculation with Agrobacterium tumerifaciens. [Source:TAIR;Acc:AT1G10417]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.