Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- plasma membrane 1
- vacuole 1
- golgi 1
- extracellular 2
- mitochondrion 1
- plastid 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G130300.1 | Wheat | nucleus | 97.21 | 97.21 |
| TraesCSU01G104600.1 | Wheat | nucleus | 96.95 | 96.46 |
| Os10t0411750-01 | Rice | cytosol, mitochondrion, nucleus | 17.51 | 63.3 |
| KXG38555 | Sorghum | cytosol | 62.18 | 61.71 |
| VIT_01s0026g01170.t01 | Wine grape | cytosol, mitochondrion | 18.78 | 40.66 |
| KRH69412 | Soybean | mitochondrion | 30.46 | 37.74 |
| KRH74731 | Soybean | mitochondrion | 29.95 | 36.99 |
| Zm00001d014189_P003 | Maize | cytosol, extracellular, nucleus | 15.99 | 36.42 |
| GSMUA_Achr6P01470_001 | Banana | endoplasmic reticulum, extracellular, nucleus | 22.84 | 35.86 |
| AT1G10417.4 | Thale cress | golgi | 30.46 | 27.21 |
| CDX93428 | Canola | golgi, nucleus, peroxisome | 27.66 | 26.27 |
| Bra019936.1-P | Field mustard | nucleus | 22.34 | 26.11 |
| CDY37980 | Canola | nucleus, peroxisome, vacuole | 29.44 | 25.95 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G231800.1 | EnsemblPlantsGene:TraesCS7A01G231800 | ncoils:Coil | SEG:seg | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr7A:+:202744709..202748237
Molecular Weight (calculated)
45021.2 Da
IEP (calculated)
4.577
GRAVY (calculated)
-0.685
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAEAAALSQ LQLQLLALVS ELRLTRERER AAREELHASS ERWKAAEEER RREARELRAE LAARDEALQR LESRVKCLEN ENELLERNEK DLKENIERLL
101: QSREAFMRQY EDSACSLQWT IQMRDKQITV ISEKLNSHLA LFNSVGKEVA AVKQVLGDVE CLVGEKENVV SDLKCKVQRI SVLEKDFVEK LSFLGDKITS
201: YQLELRNRAR IIYGLKEQLD AEKLKNNFHP QLEELKKSLL VKDEIIERLI SDKQEMLVEL HNMETALQKF QDIFSRLGHE EMKSSLPVSE SQDCKVDSIP
301: GSQVDLPNED RMIPIIDETA NANVECKSEI DTGSNQVQSP PSLKHYALPC SEPVTANVEK SECPPESEDI EMGNSSPEQQ THSANPDPEV ENQS
101: QSREAFMRQY EDSACSLQWT IQMRDKQITV ISEKLNSHLA LFNSVGKEVA AVKQVLGDVE CLVGEKENVV SDLKCKVQRI SVLEKDFVEK LSFLGDKITS
201: YQLELRNRAR IIYGLKEQLD AEKLKNNFHP QLEELKKSLL VKDEIIERLI SDKQEMLVEL HNMETALQKF QDIFSRLGHE EMKSSLPVSE SQDCKVDSIP
301: GSQVDLPNED RMIPIIDETA NANVECKSEI DTGSNQVQSP PSLKHYALPC SEPVTANVEK SECPPESEDI EMGNSSPEQQ THSANPDPEV ENQS
001: MEMLKLSKFK LQLQSMIGEV RDLRERERSV TDHITLANQK QKQTEEDCIR KVQELQADLA SSRETQEALE RKVSYLQNDY SLLENKQSEL KTTIQNLLQS
101: RESFLNAYQE SFCEMKCSIE ARDRKILMLH EKITSHLTLF DSIEKEASVI KKVIHEVQGL VDKKEDVVTG LKEKMDHVST YEKVFIENIR ALEEKLKCHE
201: TELQSKDNII SELSAQLESE KSKNEHQHQV EELQKTLQVK DLAVENLISE KEALYSEMKG LEMILQRIQE SVSLMTEEDR KVFTSILTFE QGSDERNKRS
301: RSIKSLFKLF MSLY
101: RESFLNAYQE SFCEMKCSIE ARDRKILMLH EKITSHLTLF DSIEKEASVI KKVIHEVQGL VDKKEDVVTG LKEKMDHVST YEKVFIENIR ALEEKLKCHE
201: TELQSKDNII SELSAQLESE KSKNEHQHQV EELQKTLQVK DLAVENLISE KEALYSEMKG LEMILQRIQE SVSLMTEEDR KVFTSILTFE QGSDERNKRS
301: RSIKSLFKLF MSLY
Arabidopsis Description
Encodes protein with unknown function whose expression is repressed by inoculation with Agrobacterium tumerifaciens. [Source:TAIR;Acc:AT1G10417]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.