Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 2
- plastid 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0026g01170.t01 | Wine grape | cytosol, mitochondrion | 20.72 | 28.57 |
| KRH74731 | Soybean | mitochondrion | 32.67 | 25.71 |
| KRH69412 | Soybean | mitochondrion | 32.27 | 25.47 |
| Os10t0411750-01 | Rice | cytosol, mitochondrion, nucleus | 10.76 | 24.77 |
| TraesCS7A01G231800.1 | Wheat | nucleus | 35.86 | 22.84 |
| TraesCSU01G104600.1 | Wheat | nucleus | 35.46 | 22.47 |
| TraesCS7B01G130300.1 | Wheat | nucleus | 35.06 | 22.34 |
| KXG38555 | Sorghum | cytosol | 33.47 | 21.16 |
| Bra019936.1-P | Field mustard | nucleus | 27.89 | 20.77 |
| AT1G10417.4 | Thale cress | golgi | 33.07 | 18.82 |
| CDX93428 | Canola | golgi, nucleus, peroxisome | 30.28 | 18.31 |
| CDY37980 | Canola | nucleus, peroxisome, vacuole | 30.68 | 17.23 |
| Zm00001d014189_P003 | Maize | cytosol, extracellular, nucleus | 7.57 | 10.98 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P01470_001 | EnsemblPlants:GSMUA_Achr6T01470_001 | EnsemblPlantsGene:GSMUA_Achr6G01470_001 | ncoils:Coil | SEG:seg | UniParc:UPI000295016D |
| UniProt:M0T395 | MapMan:35.2 | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G01470_001]
Coordinates
chr6:+:971342..978210
Molecular Weight (calculated)
29141.0 Da
IEP (calculated)
7.694
GRAVY (calculated)
-0.602
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLQLLFLNF YRKFYVVKYV ETEKDLLKKK EKELKETINS LLQSREAFLS HYEDSTYQLK QSIQKRDRKL VLLTEKIHTQ IQLFDSMEKE AAAIKQVVNT
101: VEDTVNGKEQ EGLLKRKVDQ ISTLEKDFKT LLVKDEVIQR LTIEKQTLYL HLGNMEVMSR KIQDTLFNVN TEDHKLLSSF IGSQEMSEMI STAKNESLEN
201: IIQENKQRLP SSTCRYHPGV SPFKECLLQN NSSEKHVVGS SSHQANEFSS G
101: VEDTVNGKEQ EGLLKRKVDQ ISTLEKDFKT LLVKDEVIQR LTIEKQTLYL HLGNMEVMSR KIQDTLFNVN TEDHKLLSSF IGSQEMSEMI STAKNESLEN
201: IIQENKQRLP SSTCRYHPGV SPFKECLLQN NSSEKHVVGS SSHQANEFSS G
001: MEMLKLSKFK LQLQSMIGEV RDLRVRRKRF LYIYGLCIFF APPVSLFFFF VFFHFTTGVF AGKGAISHRS HYSCESGSSI NKQKQTEEDC IRKVQELQAD
101: LASSRETQEA LERKVSYLQN DYSLLENKQS ELKTTIQNLL QSRESFLNAY QESFCEMKCS IEARDRKILM LHEKITSHLT LFDSIEKEAS VIKKVIHEVQ
201: GLVDKKEDVV TGLKEKMDHV STYEKVFIEN IRALEEKLKC HETELQSKDN IISELSAQLE SEKSKNEHQH QVEELQKTLQ VKDLAVENLI SEKEALYSEM
301: KGLEMILQRI QESVSLMTEE DRKVFTSILT FEQGSDERNK RSRHNDTVDK MEELLYVAPV MHSQENSVKV IPSASPRCQH QKTDCRSIQD DDHQLDSAEY
401: LQHNTVSGHW QSTNNHNHFE LEAIQRVDEP A
101: LASSRETQEA LERKVSYLQN DYSLLENKQS ELKTTIQNLL QSRESFLNAY QESFCEMKCS IEARDRKILM LHEKITSHLT LFDSIEKEAS VIKKVIHEVQ
201: GLVDKKEDVV TGLKEKMDHV STYEKVFIEN IRALEEKLKC HETELQSKDN IISELSAQLE SEKSKNEHQH QVEELQKTLQ VKDLAVENLI SEKEALYSEM
301: KGLEMILQRI QESVSLMTEE DRKVFTSILT FEQGSDERNK RSRHNDTVDK MEELLYVAPV MHSQENSVKV IPSASPRCQH QKTDCRSIQD DDHQLDSAEY
401: LQHNTVSGHW QSTNNHNHFE LEAIQRVDEP A
Arabidopsis Description
Encodes protein with unknown function whose expression is repressed by inoculation with Agrobacterium tumerifaciens. [Source:TAIR;Acc:AT1G10417]
SUBAcon: [mitochondrion,golgi,extracellular,nucleus]
SUBAcon: [mitochondrion,golgi,extracellular,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.