Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
- plastid 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G231800.1 | Wheat | nucleus | 97.21 | 97.21 |
| TraesCSU01G104600.1 | Wheat | nucleus | 97.21 | 96.72 |
| Os10t0411750-01 | Rice | cytosol, mitochondrion, nucleus | 17.77 | 64.22 |
| KXG38555 | Sorghum | cytosol | 62.18 | 61.71 |
| VIT_01s0026g01170.t01 | Wine grape | cytosol, mitochondrion | 17.77 | 38.46 |
| KRH69412 | Soybean | mitochondrion | 29.95 | 37.11 |
| KRH74731 | Soybean | mitochondrion | 29.44 | 36.36 |
| Zm00001d014189_P003 | Maize | cytosol, extracellular, nucleus | 15.48 | 35.26 |
| GSMUA_Achr6P01470_001 | Banana | endoplasmic reticulum, extracellular, nucleus | 22.34 | 35.06 |
| AT1G10417.4 | Thale cress | golgi | 29.7 | 26.53 |
| CDX93428 | Canola | golgi, nucleus, peroxisome | 26.9 | 25.54 |
| CDY37980 | Canola | nucleus, peroxisome, vacuole | 28.93 | 25.5 |
| Bra019936.1-P | Field mustard | nucleus | 21.57 | 25.22 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G130300.1 | EnsemblPlantsGene:TraesCS7B01G130300 | ncoils:Coil | SEG:seg | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr7B:+:156704141..156707660
Molecular Weight (calculated)
44928.1 Da
IEP (calculated)
4.624
GRAVY (calculated)
-0.677
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAEAAALSQ LQLQLLALVS DLRLTRERER AAREELHASS ERWKAAEEER RREARELRAE SAARDDALQR LESRVKCLEN ENELLERNEK DLKENIERLL
101: QSREAFMRQY EDSACSLQWT IQMRDKQITV ISEKLNSHLA LFNSVGKEVA AVKQILGDVE CLVGEKENVV SDLKCKVQRI SVLEKDFVEK LSFLGDKISS
201: YQLELRNRAR IIYGLKEQLD AEKLKNNFHP QLEELKKSLL VKDEIIERLI SDKQEMLVEL HNMETALQKF QDIFSRLGHE EIKSSLPVSE SQDCKVNSIP
301: GSQVDLPNED RMIPIIDETA NVNVECKSGI DTGSNQVQSP PSLKHYALPC SEPVTANVEK PECPPESEDI EMGNSSPEQQ THSANPDPEI ENQS
101: QSREAFMRQY EDSACSLQWT IQMRDKQITV ISEKLNSHLA LFNSVGKEVA AVKQILGDVE CLVGEKENVV SDLKCKVQRI SVLEKDFVEK LSFLGDKISS
201: YQLELRNRAR IIYGLKEQLD AEKLKNNFHP QLEELKKSLL VKDEIIERLI SDKQEMLVEL HNMETALQKF QDIFSRLGHE EIKSSLPVSE SQDCKVNSIP
301: GSQVDLPNED RMIPIIDETA NVNVECKSGI DTGSNQVQSP PSLKHYALPC SEPVTANVEK PECPPESEDI EMGNSSPEQQ THSANPDPEI ENQS
001: MEMLKLSKFK LQLQSMIGEV RDLRERERSV TDHITLANQK QKQTEEDCIR KVQELQADLA SSRETQEALE RKVSYLQNDY SLLENKQSEL KTTIQNLLQS
101: RESFLNAYQE SFCEMKCSIE ARDRKILMLH EKITSHLTLF DSIEKEASVI KKVIHEVQGL VDKKEDVVTG LKEKMDHVST YEKVFIENIR ALEEKLKCHE
201: TELQSKDNII SELSAQLESE KSKNEHQHQV EELQKTLQVK DLAVENLISE KEALYSEMKG LEMILQRIQE SVSLMTEEDR KVFTSILTFE QGSDERNKRS
301: RSIKSLFKLF MSLY
101: RESFLNAYQE SFCEMKCSIE ARDRKILMLH EKITSHLTLF DSIEKEASVI KKVIHEVQGL VDKKEDVVTG LKEKMDHVST YEKVFIENIR ALEEKLKCHE
201: TELQSKDNII SELSAQLESE KSKNEHQHQV EELQKTLQVK DLAVENLISE KEALYSEMKG LEMILQRIQE SVSLMTEEDR KVFTSILTFE QGSDERNKRS
301: RSIKSLFKLF MSLY
Arabidopsis Description
Encodes protein with unknown function whose expression is repressed by inoculation with Agrobacterium tumerifaciens. [Source:TAIR;Acc:AT1G10417]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.