Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- plasma membrane 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13469 | Canola | plastid | 98.34 | 99.44 |
| AT4G32020.1 | Thale cress | plastid | 72.38 | 72.38 |
| Bra011315.1-P | Field mustard | plastid | 72.38 | 64.53 |
| AT2G25250.1 | Thale cress | plastid | 42.54 | 49.68 |
| PGSC0003DMT400035166 | Potato | plastid | 26.52 | 35.56 |
| PGSC0003DMT400076868 | Potato | plastid | 32.04 | 35.15 |
| Solyc08g041860.1.1 | Tomato | plastid | 30.94 | 33.73 |
| KRH20110 | Soybean | plastid | 30.39 | 30.39 |
| VIT_11s0149g00060.t01 | Wine grape | nucleus | 31.49 | 29.69 |
| KRH03546 | Soybean | plastid | 27.07 | 26.92 |
Protein Annotations
Description
AT4G32020 (E=8e-054) | unknown protein
Coordinates
chrA03:+:28549101..28549646
Molecular Weight (calculated)
19689.1 Da
IEP (calculated)
11.808
GRAVY (calculated)
-0.546
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVAVLNPQD CLKHPLSHMK HPRNPSACPN RQKKTVSNRT RRSPPRKQTS PSPPVAPPLP KGTVKMSPNN NNNNNVVVGQ VRILKRGEGI PKKTADLVVE
101: KTDLVSTRRI GPDPGSMPSQ IRLPARKAKT VPFYAGPVTM TSPPPSDVPL PAFFAAKKSV SLFQATDATN EIIRMLRINI A
101: KTDLVSTRRI GPDPGSMPSQ IRLPARKAKT VPFYAGPVTM TSPPPSDVPL PAFFAAKKSV SLFQATDATN EIIRMLRINI A
001: MGVAVLNPQD CLKDPFSHMK QHRNPSACPN RQKKTVSNNR TRRSPPRSQS SRSSSPPVAP PLPPPRAAVS AFVPKGTLKK SLSNTVAVSQ VRILKRGEEI
101: PKETSDLVVE MSDLGSTRRI GPDPGLIPGQ IRLSGRKSKS APFYAGPVTM TSPPPSDVPL PAFFTKKATN DLIRILRLDI A
101: PKETSDLVVE MSDLGSTRRI GPDPGLIPGQ IRLSGRKSKS APFYAGPVTM TSPPPSDVPL PAFFTKKATN DLIRILRLDI A
Arabidopsis Description
AT4g32020/F10N7_170 [Source:UniProtKB/TrEMBL;Acc:O49389]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.