Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G32020.1 | Thale cress | plastid | 52.26 | 44.75 |
| CDY13469 | Canola | plastid | 49.68 | 43.02 |
| CDX72341 | Canola | plastid | 49.68 | 42.78 |
| Bra023967.1-P | Field mustard | plastid | 49.68 | 42.54 |
| CDX75213 | Canola | plastid | 49.03 | 38.78 |
| Bra011315.1-P | Field mustard | plastid | 49.03 | 37.44 |
| CDX68810 | Canola | plastid | 49.68 | 36.84 |
| PGSC0003DMT400035166 | Potato | plastid | 29.68 | 34.07 |
| PGSC0003DMT400076868 | Potato | plastid | 32.26 | 30.3 |
| Solyc08g041860.1.1 | Tomato | plastid | 32.26 | 30.12 |
| KRH20110 | Soybean | plastid | 32.26 | 27.62 |
| KRH03546 | Soybean | plastid | 30.32 | 25.82 |
| VIT_11s0149g00060.t01 | Wine grape | nucleus | 30.97 | 25.0 |
Protein Annotations
| MapMan:35.2 | EntrezGene:817063 | ProteinID:AAD23666.1 | ProteinID:AEC07676.1 | EMBL:AF325071 | EMBL:AK229376 |
| ArrayExpress:AT2G25250 | EnsemblPlantsGene:AT2G25250 | RefSeq:AT2G25250 | TAIR:AT2G25250 | RefSeq:AT2G25250-TAIR-G | EnsemblPlants:AT2G25250.1 |
| TAIR:AT2G25250.1 | EMBL:BT025546 | GO:GO:0008150 | RefSeq:NP_180097.1 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PANTHER:PTHR33670 | PANTHER:PTHR33670:SF3 | UniProt:Q9SIR8 | UniParc:UPI000009D99A | SEG:seg | : |
Description
At2g25250 [Source:UniProtKB/TrEMBL;Acc:Q9SIR8]
Coordinates
chr2:+:10753602..10754935
Molecular Weight (calculated)
17186.7 Da
IEP (calculated)
11.477
GRAVY (calculated)
-0.606
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVAVLHPHD SIINHFSTNT SPPLRHKKPI TNRRRRSPSS HQSQISHPPP SPHNHTNHVR ILKRGEDINV KIPIEKPDLK SNRQIGSDPM KISTPIRISN
101: RKSMPALFYA GPVTSTSPPP SEVPLPAFFA NKTVAGFKPT DATNDLIKIL RLDIA
101: RKSMPALFYA GPVTSTSPPP SEVPLPAFFA NKTVAGFKPT DATNDLIKIL RLDIA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.