CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023967.1-P	Field mustard	plastid	99.44	98.34
CDX72341	Canola	plastid	92.18	91.67
AT4G32020.1	Thale cress	plastid	72.63	71.82
CDX75213	Canola	plastid	72.63	66.33
CDX68810	Canola	plastid	71.51	61.24
AT2G25250.1	Thale cress	plastid	43.02	49.68
PGSC0003DMT400035166	Potato	plastid	26.82	35.56
PGSC0003DMT400076868	Potato	plastid	32.4	35.15
Solyc08g041860.1.1	Tomato	plastid	31.84	34.34
KRH20110	Soybean	plastid	30.73	30.39
VIT_11s0149g00060.t01	Wine grape	nucleus	31.84	29.69
KRH03546	Soybean	plastid	27.37	26.92

Protein Annotations

EnsemblPlants:CDY13469	EnsemblPlantsGene:GSBRNA2T00077770001	PANTHER:PTHR33670	PANTHER:PTHR33670:SF3	ProteinID:CDY13469	ProteinID:CDY13469.1
SEG:seg	UniParc:UPI0004EF3847	UniProt:A0A078FKJ4	MapMan:35.2	:	:

Description

BnaA03g51870DBnaA03g51870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FKJ4]

Coordinates

chrLK032035:+:528126..529122

Molecular Weight (calculated)

19474.9 Da

IEP (calculated)

11.808

GRAVY (calculated)

-0.511

Length

179 amino acids

Sequence
(BLAST)

001: MGVAVLNPQD CLKHPLSHMK HPRNPSACPN RQKKTVSNRT RRSPPRKQTS PSPPVAPPLP KGTVKMSPNN NNNIVVGQVR ILKRGEGIPK KTADLVVEKT
101: DLVSTRRIGP DPGSMPSQIR LPARKAKTVP FYAGPVTMTS PPPSDVPLPA FFAAKKSVSL FQATDATNEI IRMLRINIA

Best Arabidopsis Sequence Match ( AT4G32020.1 )
(BLAST)

001: MGVAVLNPQD CLKDPFSHMK QHRNPSACPN RQKKTVSNNR TRRSPPRSQS SRSSSPPVAP PLPPPRAAVS AFVPKGTLKK SLSNTVAVSQ VRILKRGEEI
101: PKETSDLVVE MSDLGSTRRI GPDPGLIPGQ IRLSGRKSKS APFYAGPVTM TSPPPSDVPL PAFFTKKATN DLIRILRLDI A

Arabidopsis Description

AT4g32020/F10N7_170 [Source:UniProtKB/TrEMBL;Acc:O49389]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.