Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 2
- cytosol 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH03546 | Soybean | plastid | 71.27 | 70.88 |
| PGSC0003DMT400035166 | Potato | plastid | 33.7 | 45.19 |
| VIT_11s0149g00060.t01 | Wine grape | nucleus | 46.41 | 43.75 |
| PGSC0003DMT400076868 | Potato | plastid | 38.12 | 41.82 |
| Solyc08g041860.1.1 | Tomato | plastid | 37.57 | 40.96 |
| AT4G32020.1 | Thale cress | plastid | 33.7 | 33.7 |
| AT2G25250.1 | Thale cress | plastid | 27.62 | 32.26 |
| CDX72341 | Canola | plastid | 31.49 | 31.67 |
| CDY13469 | Canola | plastid | 30.39 | 30.73 |
| CDX75213 | Canola | plastid | 33.15 | 30.61 |
| Bra023967.1-P | Field mustard | plastid | 30.39 | 30.39 |
| Bra011315.1-P | Field mustard | plastid | 33.7 | 30.05 |
| CDX68810 | Canola | plastid | 33.15 | 28.71 |
Protein Annotations
| EMBL:ACUP02008239 | EnsemblPlants:KRH20110 | EnsemblPlantsGene:GLYMA_13G156700 | EntrezGene:102661202 | PANTHER:PTHR33670 | PANTHER:PTHR33670:SF3 |
| PFAM:PF15365 | ProteinID:KRH20110 | ProteinID:KRH20110.1 | SEG:seg | UniParc:UPI00023CF290 | UniProt:I1LZN0 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:27196655..27197788
Molecular Weight (calculated)
19793.6 Da
IEP (calculated)
11.966
GRAVY (calculated)
-0.564
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTAILRSHD CLQGRFLHNE AFAIATSRVA SRRNPNSNNN NHNSFASSAN QNCRRKRSPV TDRERRRSPP NLVTGHVKIL KRGEKLSLQN KNQRLAVSAE
101: NVLVKNDVGL DLLLGSTDRL GPGPLTVKKQ IRVSDANNNG VYAGSAFVSS PHPSSVPVPG FLVRNGAATS NLRRLLRLDL E
101: NVLVKNDVGL DLLLGSTDRL GPGPLTVKKQ IRVSDANNNG VYAGSAFVSS PHPSSVPVPG FLVRNGAATS NLRRLLRLDL E
001: MATAMSYSSQ NHRFEHQTLI HRNPKPRLCR NSSTAPRRRK QSPTVVKSPA ANPNLVMEQV KILKRGETLS AFNKNKENIS SDDTRRPVLK MIKDVDLIVS
101: ATNRIGPEPE ILMKQIGALG LQSFAGANCS LSPPPSCVPI PCFLGTKNNL LV
101: ATNRIGPEPE ILMKQIGALG LQSFAGANCS LSPPPSCVPI PCFLGTKNNL LV
Arabidopsis Description
At4g02040 [Source:UniProtKB/TrEMBL;Acc:O04248]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.