CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13469	Canola	plastid	91.67	92.18
AT4G32020.1	Thale cress	plastid	71.67	71.27
CDX75213	Canola	plastid	72.78	66.84
CDX68810	Canola	plastid	71.67	61.72
AT2G25250.1	Thale cress	plastid	42.78	49.68
PGSC0003DMT400035166	Potato	plastid	27.78	37.04
PGSC0003DMT400076868	Potato	plastid	32.78	35.76
Solyc08g041860.1.1	Tomato	plastid	31.67	34.34
KRH20110	Soybean	plastid	31.67	31.49
VIT_11s0149g00060.t01	Wine grape	nucleus	32.22	30.21
KRH03546	Soybean	plastid	27.22	26.92

Protein Annotations

EnsemblPlants:CDX72341	EnsemblPlantsGene:GSBRNA2T00099833001	PANTHER:PTHR33670	PANTHER:PTHR33670:SF3	ProteinID:CDX72341	ProteinID:CDX72341.1
SEG:seg	UniParc:UPI0004EE8D85	MapMan:35.2	:	:	:

Description

BnaC07g43630D

Coordinates

chrLK031796:+:774595..775709

Molecular Weight (calculated)

19640.1 Da

IEP (calculated)

11.773

GRAVY (calculated)

-0.530

Length

180 amino acids

Sequence
(BLAST)

001: MGVAVLNPQD CLKHPLSHMK HPRNPSACPN RQKKPVSNRT RRSPPRKQTS PSPPVAPPLP KGTVTTRPNN NNNSVVAGQV RILKRGEEIP KKTTDLVVEK
101: TDLVSTRRIG PDPGMVPSQI RLPVRKAKTV PFYAGPVTMT SPPPSDVPLP AFFAAKKSVS LFQAADATNE IIRMLRLNIA

Best Arabidopsis Sequence Match ( AT4G32020.1 )
(BLAST)

001: MGVAVLNPQD CLKDPFSHMK QHRNPSACPN RQKKTVSNNR TRRSPPRSQS SRSSSPPVAP PLPPPRAAVS AFVPKGTLKK SLSNTVAVSQ VRILKRGEEI
101: PKETSDLVVE MSDLGSTRRI GPDPGLIPGQ IRLSGRKSKS APFYAGPVTM TSPPPSDVPL PAFFTKKATN DLIRILRLDI A

Arabidopsis Description

AT4g32020/F10N7_170 [Source:UniProtKB/TrEMBL;Acc:O49389]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.