Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g041860.1.1 | Tomato | plastid | 87.27 | 86.75 |
| PGSC0003DMT400035166 | Potato | plastid | 58.79 | 71.85 |
| VIT_11s0149g00060.t01 | Wine grape | nucleus | 44.85 | 38.54 |
| KRH20110 | Soybean | plastid | 41.82 | 38.12 |
| KRH03546 | Soybean | plastid | 41.21 | 37.36 |
| AT4G32020.1 | Thale cress | plastid | 36.36 | 33.15 |
| CDX72341 | Canola | plastid | 35.76 | 32.78 |
| CDY13469 | Canola | plastid | 35.15 | 32.4 |
| AT2G25250.1 | Thale cress | plastid | 30.3 | 32.26 |
| Bra023967.1-P | Field mustard | plastid | 35.15 | 32.04 |
| CDX75213 | Canola | plastid | 35.76 | 30.1 |
| Bra011315.1-P | Field mustard | plastid | 35.76 | 29.06 |
| CDX68810 | Canola | plastid | 34.55 | 27.27 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400076868 | EnsemblPlantsGene:PGSC0003DMG400029898 | EntrezGene:107060270 | PANTHER:PTHR33670 | PANTHER:PTHR33670:SF3 | PFAM:PF15365 |
| PGSC:PGSC0003DMG400029898 | RefSeq:XP_015163436.1 | SEG:seg | UniParc:UPI00029637C8 | UniProt:M1CXI7 | MapMan:35.2 |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400029898]
Coordinates
chr8:+:20914119..20915153
Molecular Weight (calculated)
18234.9 Da
IEP (calculated)
10.938
GRAVY (calculated)
-0.690
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGVALLQPQ DVLKHHVSYR QPMRSRRNST SNPLPNPNPN PKNNRRKRSP QKNGSANFST CPPSAKNLHL VMGEVKILKR GQVLKENKLV TGEDLVLSTS
101: DRLGPEPDMV PKNITIAHFY AGSGFSSSSP PPSSLPVPAF FKKESEHNLH ATSDLRRLLR IDLAD
101: DRLGPEPDMV PKNITIAHFY AGSGFSSSSP PPSSLPVPAF FKKESEHNLH ATSDLRRLLR IDLAD
001: MGVAVLNPQD CLKDPFSHMK QHRNPSACPN RQKKTVSNNR TRRSPPRSQS SRSSSPPVAP PLPPPRAAVS AFVPKGTLKK SLSNTVAVSQ VRILKRGEEI
101: PKETSDLVVE MSDLGSTRRI GPDPGLIPGQ IRLSGRKSKS APFYAGPVTM TSPPPSDVPL PAFFTKKATN DLIRILRLDI A
101: PKETSDLVVE MSDLGSTRRI GPDPGLIPGQ IRLSGRKSKS APFYAGPVTM TSPPPSDVPL PAFFTKKATN DLIRILRLDI A
Arabidopsis Description
AT4g32020/F10N7_170 [Source:UniProtKB/TrEMBL;Acc:O49389]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.