Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 5
- cytosol 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75213 | Canola | plastid | 96.55 | 100.0 |
| CDX68810 | Canola | plastid | 95.57 | 92.82 |
| AT4G32020.1 | Thale cress | plastid | 67.0 | 75.14 |
| Bra023967.1-P | Field mustard | plastid | 64.53 | 72.38 |
| AT2G25250.1 | Thale cress | plastid | 37.44 | 49.03 |
| PGSC0003DMT400035166 | Potato | plastid | 25.12 | 37.78 |
| PGSC0003DMT400076868 | Potato | plastid | 29.06 | 35.76 |
| Solyc08g041860.1.1 | Tomato | plastid | 28.08 | 34.34 |
| KRH20110 | Soybean | plastid | 30.05 | 33.7 |
| KRH03546 | Soybean | plastid | 28.57 | 31.87 |
| VIT_11s0149g00060.t01 | Wine grape | nucleus | 29.06 | 30.73 |
Protein Annotations
Description
AT4G32020 (E=6e-033) | unknown protein
Coordinates
chrA01:-:2759913..2760524
Molecular Weight (calculated)
22556.7 Da
IEP (calculated)
10.896
GRAVY (calculated)
-0.580
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVAVLNPQD CLKQPFSHMK YPRNHTACPN RHQKKPVPNR TRRSPPRNQT TRSPPKAPPP PPQRAAVSSY VPKGTVEKSP NKNVVVGQVR ILKRGEEIPK
101: KTLELVVEKT NLVVEKTDLV VEKPDLVSTQ RIGPDPCLIP SQIRLSDRKS KKTTVVPFYA GPVTMTSPPP SDVPLPAFFT TKKDATNHII KLLRLDVACM
201: SLQ
101: KTLELVVEKT NLVVEKTDLV VEKPDLVSTQ RIGPDPCLIP SQIRLSDRKS KKTTVVPFYA GPVTMTSPPP SDVPLPAFFT TKKDATNHII KLLRLDVACM
201: SLQ
001: MGVAVLNPQD CLKDPFSHMK QHRNPSACPN RQKKTVSNNR TRRSPPRSQS SRSSSPPVAP PLPPPRAAVS AFVPKGTLKK SLSNTVAVSQ VRILKRGEEI
101: PKETSDLVVE MSDLGSTRRI GPDPGLIPGQ IRLSGRKSKS APFYAGPVTM TSPPPSDVPL PAFFTKKATN DLIRILRLDI A
101: PKETSDLVVE MSDLGSTRRI GPDPGLIPGQ IRLSGRKSKS APFYAGPVTM TSPPPSDVPL PAFFTKKATN DLIRILRLDI A
Arabidopsis Description
AT4g32020/F10N7_170 [Source:UniProtKB/TrEMBL;Acc:O49389]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.