CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011315.1-P	Field mustard	plastid	100.0	96.55
CDX68810	Canola	plastid	96.94	90.91
AT4G32020.1	Thale cress	plastid	69.39	75.14
CDX72341	Canola	plastid	66.84	72.78
CDY13469	Canola	plastid	66.33	72.63
AT2G25250.1	Thale cress	plastid	38.78	49.03
PGSC0003DMT400035166	Potato	plastid	26.02	37.78
PGSC0003DMT400076868	Potato	plastid	30.1	35.76
Solyc08g041860.1.1	Tomato	plastid	29.08	34.34
KRH20110	Soybean	plastid	30.61	33.15
KRH03546	Soybean	plastid	29.59	31.87
VIT_11s0149g00060.t01	Wine grape	nucleus	30.1	30.73

Protein Annotations

EnsemblPlants:CDX75213	EnsemblPlantsGene:GSBRNA2T00121063001	PANTHER:PTHR33670	PANTHER:PTHR33670:SF3	ProteinID:CDX75213	ProteinID:CDX75213.1
SEG:seg	UniParc:UPI0004EEBCC0	MapMan:35.2	:	:	:

Description

BnaA01g04890D

Coordinates

chrLK031804:+:149333..150606

Molecular Weight (calculated)

21771.7 Da

IEP (calculated)

11.023

GRAVY (calculated)

-0.604

Length

196 amino acids

Sequence
(BLAST)

001: MGVAVLNPQD CLKQPFSHMK YPRNHTACPN RHQKKPVPNR TRRSPPRNQT TRSPPKAPPP PPQRAAVSSY VPKGTVEKSP NKNVVVGQVR ILKRGEEIPK
101: KTLELVVEKT NLVVEKPDLV STQRIGPDPC LIPSQIRLSD RKSKKTTVVP FYAGPVTMTS PPPSDVPLPA FFTTKKDATN HIIKLLRLDV ACMSLQ

Best Arabidopsis Sequence Match ( AT4G32020.1 )
(BLAST)

001: MGVAVLNPQD CLKDPFSHMK QHRNPSACPN RQKKTVSNNR TRRSPPRSQS SRSSSPPVAP PLPPPRAAVS AFVPKGTLKK SLSNTVAVSQ VRILKRGEEI
101: PKETSDLVVE MSDLGSTRRI GPDPGLIPGQ IRLSGRKSKS APFYAGPVTM TSPPPSDVPL PAFFTKKATN DLIRILRLDI A

Arabidopsis Description

AT4g32020/F10N7_170 [Source:UniProtKB/TrEMBL;Acc:O49389]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.