Factsheet for Bra039862.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47154	Canola	nucleus	99.13	99.13
AT1G30545.2	Thale cress	mitochondrion	78.26	77.25
Bra026224.1-P	Field mustard	cytosol	69.57	71.75
VIT_09s0018g01550.t01	Wine grape	cytosol	62.17	57.66
Bra014884.1-P	Field mustard	cytosol	68.26	57.51
Solyc01g104990.2.1	Tomato	cytosol	59.57	56.61
PGSC0003DMT400032794	Potato	cytosol, mitochondrion	60.0	56.33
TraesCS7A01G151900.1	Wheat	cytosol	44.35	53.68
GSMUA_Achr6P30880_001	Banana	cytosol, mitochondrion, nucleus, plastid	56.52	49.06
OQU75980	Sorghum	mitochondrion	53.48	41.14
TraesCS7D01G153600.1	Wheat	mitochondrion, plastid	54.78	40.65
TraesCS7B01G055700.1	Wheat	cytosol, plastid	54.78	38.18
Zm00001d045079_P001	Maize	mitochondrion	53.91	36.8
Bra040262.1-P	Field mustard	cytosol	52.17	20.98

Protein Annotations

EnsemblPlants:Bra039862.1	EnsemblPlants:Bra039862.1-P	EnsemblPlantsGene:Bra039862	Gene3D:3.40.50.150	GO:GO:0001510	GO:GO:0003674
GO:GO:0003824	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009452
GO:GO:0009987	GO:GO:0016740	InterPro:RNA_cap_Gua-N2-MeTrfase	InterPro:SAM-dependent_MTases	PANTHER:PTHR14741	PFAM:PF09445
SEG:seg	SUPFAM:SSF53335	UniParc:UPI000254582E	UniProt:M4FFI8	MapMan:35.2	:

Description

AT1G30550 (E=3e-097) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: WW domain-containing protein (TAIR:AT1G45231.2); Has 891 Blast hits to 591 proteins in 275 species: Archae - 68; Bacteria - 248; Metazoa - 211; Fungi - 176; Plants - 45; Viruses - 3; Other Eukaryotes - 140 (source: NCBI BLink).

Coordinates

chrA08:+:6232012..6233139

Molecular Weight (calculated)

25858.2 Da

IEP (calculated)

4.649

GRAVY (calculated)

-0.095

Length

230 amino acids

Sequence
(BLAST)

001: MARKRKRSLL EQVINSPAEK EESTSPKLTK YWLQRYNLFS RYDEGIEMDE EGWYSVTPEE IAVKQAERCR GKVVIDCFSG VGGNTIQFAK VCSSVIAIDI
101: DPVKVEMAIN NALVYGVDDR VDYVVGDFIH LAPSLKGDVL FLSPPWGGPM YNKVETYTLD MLQPKDGYKL FQIAQTITPN IIMFLPRNVD LAQLEELAWL
201: SSPPLTLEIE ENCVGGRIKG ITAYFSCCAV

Best Arabidopsis Sequence Match ( AT1G30545.2 )
(BLAST)

001: MTRSMKLKKR SRLKKEVKST IEKDNGRRHK ITKYWIQRYD LFSRYDQGIE MDEEGWYSVT PEEIAIKQAQ RYRGKVVIDC FSGVGGNTIQ FAKVCSSVVA
101: IDIDPVKVEL AMNNAMVYGV ANRVDFVIGD FIQLAPSLKG DVVFLSPPWG GPMYRDFESY NLDMLQPRDG YSLFQIAQSI TPNIIMFLPR NVDLAQVEEL
201: AWLSSPPLNL EIEENFVGGR MKAVTAYFSC NAV

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8ASE3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.