Factsheet for Bra014884.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026224.1-P	Field mustard	cytosol	71.79	87.89
CDY05312	Canola	cytosol	61.54	85.28
AT1G30550.2	Thale cress	extracellular	60.44	69.04
Bra039862.1-P	Field mustard	cytosol	57.51	68.26
PGSC0003DMT400032794	Potato	cytosol, mitochondrion	47.25	52.65
Solyc01g104990.2.1	Tomato	cytosol	46.15	52.07
VIT_09s0018g01550.t01	Wine grape	cytosol	45.79	50.4
TraesCS7A01G151900.1	Wheat	cytosol	32.6	46.84
GSMUA_Achr6P30880_001	Banana	cytosol, mitochondrion, nucleus, plastid	43.96	45.28
OQU75980	Sorghum	mitochondrion	37.36	34.11
TraesCS7D01G153600.1	Wheat	mitochondrion, plastid	38.46	33.87
TraesCS7B01G055700.1	Wheat	cytosol, plastid	38.46	31.82
Zm00001d045079_P001	Maize	mitochondrion	38.46	31.16
Bra040262.1-P	Field mustard	cytosol	42.12	20.1

Protein Annotations

EnsemblPlants:Bra014884.1	EnsemblPlants:Bra014884.1-P	EnsemblPlantsGene:Bra014884	Gene3D:3.40.50.150	GO:GO:0001510	GO:GO:0003674
GO:GO:0003824	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009452
GO:GO:0009987	GO:GO:0016740	InterPro:RNA_cap_Gua-N2-MeTrfase	InterPro:SAM-dependent_MTases	PANTHER:PTHR14741	PFAM:PF09445
SEG:seg	SUPFAM:SSF53335	UniParc:UPI0002540F44	UniProt:M4DEG3	MapMan:35.2	:

Description

AT1G30550 (E=1e-082) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: WW domain-containing protein (TAIR:AT1G45231.2).

Coordinates

chrA07:+:5600232..5601877

Molecular Weight (calculated)

30155.2 Da

IEP (calculated)

6.505

GRAVY (calculated)

-0.075

Length

273 amino acids

Sequence
(BLAST)

001: MTIDDQSHLK KEGENSTNPK INRYWIQRYD LFSRYDEGIQ IDEEGWYSVT HEEIAIKHAE RCRGKVVIDC FAGVGGNTIQ FAKVSSSVIA IDIDPMKVQM
101: AMNNANVYGV ANHVDFVVGD FFSLAPSLKG DVSFLSPPWG GPNYCKVESF KMDMLQPRDG YSLFKIVQSI TPNIIMYLPK NVDLAQLEEL ASLSSPPLTL
201: EIEESCIGGK RRSKGRALLI CLLSNHLSIV GYLASKGLTG STAAVAVAVD ESRINHRLCW TIPASSFGLC PSR

Best Arabidopsis Sequence Match ( AT1G30550.2 )
(BLAST)

001: MFQSYVTFLL SYISLVFLYS TEAESLIEKE HGTNPKISRY WIQRYDLFSK YDQGIEMDEE GWYSVTPEEI AIKQAERCRG KVVIDCFSGV GGNTIQFAKV
101: CSSVIAIDID PMKIALAMNN AKVYGVANRI DFVTGDFMQL APSLKGDVLF LSPPWGGPTY SKVESYKLDM LLPRDGYSLF QTALSITPNI IMFLPKNIDL
201: AQLEELACLS SPPLTLEIEE NSIGGEIKAI TAYFSSNVV

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:TAIR;Acc:AT1G30550]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.