Factsheet for PGSC0003DMT400032794

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 3
plastid 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g104990.2.1	Tomato	cytosol	94.69	95.87
VIT_09s0018g01550.t01	Wine grape	cytosol	65.31	64.52
Bra039862.1-P	Field mustard	cytosol	56.33	60.0
CDY12465	Canola	cytosol	56.33	60.0
Bra026224.1-P	Field mustard	cytosol	54.29	59.64
CDY47154	Canola	nucleus	55.92	59.57
AT1G30545.2	Thale cress	mitochondrion	56.33	59.23
CDX77588	Canola	cytosol	53.88	59.19
CDY05312	Canola	cytosol	47.35	58.88
AT1G30550.2	Thale cress	extracellular	56.33	57.74
TraesCS7A01G151900.1	Wheat	cytosol	41.22	53.16
GSMUA_Achr6P30880_001	Banana	cytosol, mitochondrion, nucleus, plastid	57.14	52.83
Bra014884.1-P	Field mustard	cytosol	52.65	47.25
CDY02304	Canola	cytosol, mitochondrion, plasma membrane, plastid	31.84	46.99
CDX98214	Canola	cytosol	54.29	43.75
OQU75980	Sorghum	mitochondrion	50.2	41.14
TraesCS7D01G153600.1	Wheat	mitochondrion, plastid	51.84	40.97
TraesCS7B01G055700.1	Wheat	cytosol, plastid	49.8	36.97
Zm00001d045079_P001	Maize	mitochondrion	48.98	35.61
CDY57504	Canola	nucleus, plastid	42.45	23.53
PGSC0003DMT400039918	Potato	cytosol	49.8	20.75

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.2	GO:GO:0001510	GO:GO:0003674	GO:GO:0003824	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009452	GO:GO:0009987	GO:GO:0016740
UniProt:M1AY22	PFAM:PF09445	EnsemblPlantsGene:PGSC0003DMG400012593	PGSC:PGSC0003DMG400012593	EnsemblPlants:PGSC0003DMT400032794	PANTHER:PTHR14741
PANTHER:PTHR14741:SF33	InterPro:RNA_cap_Gua-N2-MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI000296080D	SEG:seg

Description

PRIP-interacting protein [Source:PGSC_GENE;Acc:PGSC0003DMG400012593]

Coordinates

chr1:+:81760518..81765028

Molecular Weight (calculated)

27515.7 Da

IEP (calculated)

9.600

GRAVY (calculated)

0.020

Length

245 amino acids

Sequence
(BLAST)

001: MVGKRKGKII KRRVKFKGKW RIKKAVVVKD EGVSPLVKKY WVQRYDLFLR YDQGIKMDEE GWFSVTPEKI ALRHASRCGG GVVIDGFAGV GGNAIQFATM
101: CHHVIAIDID PRKIALAFEN AKIYGVEDHI EFIVGDFFQL APSLKGNVVF LSPPWGGPAY STKESFTLDL LKPKNGYSLF QVAQSVAPNI IMYLPRNVDL
201: LQVEELAWLS SPPLKVEIEE NMLHGMLKSI TAYFGDIAFS DVSMF

Best Arabidopsis Sequence Match ( AT1G30545.2 )
(BLAST)

001: MTRSMKLKKR SRLKKEVKST IEKDNGRRHK ITKYWIQRYD LFSRYDQGIE MDEEGWYSVT PEEIAIKQAQ RYRGKVVIDC FSGVGGNTIQ FAKVCSSVVA
101: IDIDPVKVEL AMNNAMVYGV ANRVDFVIGD FIQLAPSLKG DVVFLSPPWG GPMYRDFESY NLDMLQPRDG YSLFQIAQSI TPNIIMFLPR NVDLAQVEEL
201: AWLSSPPLNL EIEENFVGGR MKAVTAYFSC NAV

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8ASE3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.