CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47154	Canola	nucleus	96.52	96.52
AT1G30545.2	Thale cress	mitochondrion	77.83	76.82
CDX77588	Canola	cytosol	70.0	72.2
CDY05312	Canola	cytosol	59.57	69.54
CDY02304	Canola	cytosol, mitochondrion, plasma membrane, plastid	43.48	60.24
Solyc01g104990.2.1	Tomato	cytosol	59.57	56.61
VIT_09s0018g01550.t01	Wine grape	cytosol	60.87	56.45
PGSC0003DMT400032794	Potato	cytosol, mitochondrion	60.0	56.33
CDX98214	Canola	cytosol	70.87	53.62
TraesCS7A01G151900.1	Wheat	cytosol	43.91	53.16
GSMUA_Achr6P30880_001	Banana	cytosol, mitochondrion, nucleus, plastid	56.09	48.68
OQU75980	Sorghum	mitochondrion	53.04	40.8
TraesCS7D01G153600.1	Wheat	mitochondrion, plastid	54.35	40.32
TraesCS7B01G055700.1	Wheat	cytosol, plastid	54.35	37.88
Zm00001d045079_P001	Maize	mitochondrion	53.48	36.5
CDY57504	Canola	nucleus, plastid	59.13	30.77
CDY71252	Canola	cytosol	48.7	21.62
CDY53935	Canola	cytosol	50.87	20.42
CDY53955	Canola	cytosol	33.04	16.34

Protein Annotations

KEGG:00253+2.1.1.-	KEGG:00270+2.1.1.-	KEGG:00332+2.1.1.-	KEGG:00340+2.1.1.-	KEGG:00350+2.1.1.-	KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-	KEGG:00450+2.1.1.-	KEGG:00522+2.1.1.-	KEGG:00523+2.1.1.-	KEGG:00624+2.1.1.-	KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-	KEGG:00940+2.1.1.-	KEGG:00941+2.1.1.-	KEGG:00942+2.1.1.-	KEGG:00945+2.1.1.-	KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-	Gene3D:3.40.50.150	MapMan:35.2	GO:A0A078FDK6	UniProt:A0A078FDK6	EnsemblPlants:CDY12465
ProteinID:CDY12465	ProteinID:CDY12465.1	GO:GO:0001510	GO:GO:0003674	GO:GO:0003824	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009452	GO:GO:0009987	GO:GO:0016740
EnsemblPlantsGene:GSBRNA2T00061752001	PFAM:PF09445	PANTHER:PTHR14741	InterPro:RNA_cap_Gua-N2-MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335
UniParc:UPI0004EC3445	SEG:seg	:	:	:	:

Description

BnaC08g09540DBnaC08g09540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDK6]

Coordinates

chrLK032022:+:783216..784625

Molecular Weight (calculated)

25840.3 Da

IEP (calculated)

5.121

GRAVY (calculated)

-0.063

Length

230 amino acids

Sequence
(BLAST)

001: MARKRKRSLL EQVINSPAEK EQSTSPKLTK YWLQRYDLFS RYDEGIQMDE EGWYSVTPEK IAVKQAERCR GKVVIDCFSG VGGNTIQFAK VCSSVIAIDI
101: DPVKVEMAIN NAMVYGVDDR VDYVVGDFIH LAPSLKGDVL FLSPPWGGPM YNKVEIYTLD MLQPKDGYKL FQIAQTITPN IIMFLPRNVD LAQLEELAWL
201: SSPPLTLVIE ENCVGGRIKG ITAYFSCSAV

Best Arabidopsis Sequence Match ( AT1G30545.2 )
(BLAST)

001: MTRSMKLKKR SRLKKEVKST IEKDNGRRHK ITKYWIQRYD LFSRYDQGIE MDEEGWYSVT PEEIAIKQAQ RYRGKVVIDC FSGVGGNTIQ FAKVCSSVVA
101: IDIDPVKVEL AMNNAMVYGV ANRVDFVIGD FIQLAPSLKG DVVFLSPPWG GPMYRDFESY NLDMLQPRDG YSLFQIAQSI TPNIIMFLPR NVDLAQVEEL
201: AWLSSPPLNL EIEENFVGGR MKAVTAYFSC NAV

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8ASE3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.