Factsheet for Solyc01g104990.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032794	Potato	cytosol, mitochondrion	95.87	94.69
VIT_09s0018g01550.t01	Wine grape	cytosol	66.53	64.92
Bra039862.1-P	Field mustard	cytosol	56.61	59.57
CDY12465	Canola	cytosol	56.61	59.57
CDY47154	Canola	nucleus	56.2	59.13
AT1G30545.2	Thale cress	mitochondrion	56.61	58.8
Bra026224.1-P	Field mustard	cytosol	53.72	58.3
CDY05312	Canola	cytosol	47.11	57.87
CDX77588	Canola	cytosol	53.31	57.85
AT1G30550.2	Thale cress	extracellular	56.2	56.9
TraesCS7A01G151900.1	Wheat	cytosol	41.32	52.63
GSMUA_Achr6P30880_001	Banana	cytosol, mitochondrion, nucleus, plastid	56.61	51.7
CDY02304	Canola	cytosol, mitochondrion, plasma membrane, plastid	31.82	46.39
Bra014884.1-P	Field mustard	cytosol	52.07	46.15
CDX98214	Canola	cytosol	53.72	42.76
OQU75980	Sorghum	mitochondrion	50.41	40.8
TraesCS7D01G153600.1	Wheat	mitochondrion, plastid	51.24	40.0
TraesCS7B01G055700.1	Wheat	cytosol, plastid	50.41	36.97
Zm00001d045079_P001	Maize	mitochondrion	49.17	35.31
CDY57504	Canola	nucleus, plastid	41.74	22.85
Solyc12g088810.1.1	Tomato	cytosol, mitochondrion	50.83	17.93

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.2	GO:GO:0001510	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0009452	GO:GO:0009987	GO:GO:0016740	GO:GO:0036261	GO:GO:0071164
UniProt:K4B271	PFAM:PF09445	PANTHER:PTHR14741	PANTHER:PTHR14741:SF33	InterPro:RNA_cap_Gua-N2-MeTrfase	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	EnsemblPlantsGene:Solyc01g104990.2	EnsemblPlants:Solyc01g104990.2.1	UniParc:UPI0002768D79	SEG:seg	:

Description

No Description!

Coordinates

chr1:+:93303960..93308470

Molecular Weight (calculated)

27371.4 Da

IEP (calculated)

9.435

GRAVY (calculated)

-0.108

Length

242 amino acids

Sequence
(BLAST)

001: MVGKRKGKII KRRVKFKEKW RTKKDEGVSP LVKKYWVQRY DLFLRYDQGI KMDEEGWFSV TPEKIALRHA SRCGGGVVID GFTGVGGNAI QFATMCHHVI
101: AIDIDPKKIA LAFENAKIYG VEDHIEFIVG DFFQLASSLK GNVVFLSPPW GGPSYSTKES FTLDLLKPKN GYSLFQVAQS VAPNIIMYLP RNVDLLQVEE
201: LAWLSSPPLK VEMEENMLHG RLKSITAYFG DIAFSDVSMF QL

Best Arabidopsis Sequence Match ( AT1G30545.2 )
(BLAST)

001: MTRSMKLKKR SRLKKEVKST IEKDNGRRHK ITKYWIQRYD LFSRYDQGIE MDEEGWYSVT PEEIAIKQAQ RYRGKVVIDC FSGVGGNTIQ FAKVCSSVVA
101: IDIDPVKVEL AMNNAMVYGV ANRVDFVIGD FIQLAPSLKG DVVFLSPPWG GPMYRDFESY NLDMLQPRDG YSLFQIAQSI TPNIIMFLPR NVDLAQVEEL
201: AWLSSPPLNL EIEENFVGGR MKAVTAYFSC NAV

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8ASE3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.