Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- nucleus 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400039918 | Potato | cytosol | 78.86 | 92.01 |
| Solyc01g104990.2.1 | Tomato | cytosol | 17.93 | 50.83 |
| GSMUA_Achr2P00940_001 | Banana | nucleus | 22.3 | 45.4 |
| AT1G45231.2 | Thale cress | cytosol | 30.32 | 38.66 |
| TraesCS1A01G432300.1 | Wheat | cytosol | 22.74 | 36.62 |
| CDY71252 | Canola | cytosol | 27.55 | 36.49 |
| TraesCS1B01G467900.1 | Wheat | cytosol | 21.57 | 35.84 |
| Bra040262.1-P | Field mustard | cytosol | 28.28 | 33.92 |
| CDY53935 | Canola | cytosol | 28.13 | 33.68 |
| VIT_18s0001g10430.t01 | Wine grape | cytosol | 36.88 | 32.44 |
| KXG39199 | Sorghum | cytosol | 31.49 | 32.34 |
| KRH15371 | Soybean | cytosol | 33.38 | 31.98 |
| Zm00001d029429_P001 | Maize | cytosol | 31.2 | 31.47 |
| Os03t0396900-02 | Rice | cytosol | 31.49 | 31.3 |
| CDY53955 | Canola | cytosol | 20.99 | 30.97 |
| TraesCS1B01G465400.2 | Wheat | cytosol | 31.49 | 29.63 |
| TraesCS1D01G439800.1 | Wheat | cytosol | 30.9 | 28.84 |
| HORVU1Hr1G093790.4 | Barley | mitochondrion | 30.32 | 27.84 |
| TraesCS1A01G430700.2 | Wheat | cytosol | 27.99 | 27.31 |
| KRH05676 | Soybean | endoplasmic reticulum | 26.97 | 26.43 |
Protein Annotations
| Gene3D:2.20.70.10 | Gene3D:3.40.50.150 | MapMan:35.2 | ncoils:Coil | GO:GO:0001510 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
| GO:GO:0009409 | GO:GO:0009452 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0036261 |
| GO:GO:0071164 | InterPro:IPR001202 | UniProt:K4DGV2 | PFAM:PF09445 | PFscan:PS50020 | PANTHER:PTHR14741 |
| PANTHER:PTHR14741:SF33 | InterPro:RNA_cap_Gua-N2-MeTrfase | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 | EnsemblPlantsGene:Solyc12g088810.1 | EnsemblPlants:Solyc12g088810.1.1 |
| UniParc:UPI0002769460 | InterPro:WW_dom | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr12:-:64036036..64042426
Molecular Weight (calculated)
76916.2 Da
IEP (calculated)
4.654
GRAVY (calculated)
-0.522
Length
686 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSKRVGSGR RHFQLFPINQ WRFNSKPDPN PFICLHHLPL FFELTELNFL RDYSQEGKVL LESANTDVYK SNASPLNVLA DFGSLLEDLE LARQMNEMGL
101: PVSFHTKKEQ KRNRTVKGKR KDGKKKILSS CENTQDEVLT SIQELKEEFE PNGTLHGNSN KDSSYLSLLG QREFSSFYTG DGDYHRLNGG EEGLNNLSAG
201: SAHTSLECID CNQQSGLSLD NTKDNVSICE KVQVEKDVGV MVGSSVECGN HAESCPKNSN VDSRCISGEA SNGHCEGNPL NGEQMEYACM ECSLSAEQVE
301: SIATQSAEHC TEDGLLFDVV GEELNSCKAT NNNCEGTTND WRFYWDNDYQ RNYFYNIVTM QCTWDPPPGM DDLIFTNFTT KQPETALEMV ELDDADLKES
401: NDLQTSASLP SELDIADGII EDDVLLDRQL DELEGAGQFA DNLCTLSSTK QKKRVRKTKA KWKLPTEAQE LEFCNTNEEI SPSLNKYWCQ RYLLFNKYDD
501: GIKMDGEGWF SVTPEAIAKH HALRCGSGTI VDLFTGVGGN SIQFAMRSKH VIAIDIDPKR IDLAQYNAAI YGVRDQIDFI RGDSFVLAPN LKADVVFMSP
601: PWGGPDYLKE RTFDMKTMLR PHDGNFLFSI GRGIASKVVM FLPRNVDINE LAELSLSANP PWSLEVEKNY LNGKLKAITA YFCKPS
101: PVSFHTKKEQ KRNRTVKGKR KDGKKKILSS CENTQDEVLT SIQELKEEFE PNGTLHGNSN KDSSYLSLLG QREFSSFYTG DGDYHRLNGG EEGLNNLSAG
201: SAHTSLECID CNQQSGLSLD NTKDNVSICE KVQVEKDVGV MVGSSVECGN HAESCPKNSN VDSRCISGEA SNGHCEGNPL NGEQMEYACM ECSLSAEQVE
301: SIATQSAEHC TEDGLLFDVV GEELNSCKAT NNNCEGTTND WRFYWDNDYQ RNYFYNIVTM QCTWDPPPGM DDLIFTNFTT KQPETALEMV ELDDADLKES
401: NDLQTSASLP SELDIADGII EDDVLLDRQL DELEGAGQFA DNLCTLSSTK QKKRVRKTKA KWKLPTEAQE LEFCNTNEEI SPSLNKYWCQ RYLLFNKYDD
501: GIKMDGEGWF SVTPEAIAKH HALRCGSGTI VDLFTGVGGN SIQFAMRSKH VIAIDIDPKR IDLAQYNAAI YGVRDQIDFI RGDSFVLAPN LKADVVFMSP
601: PWGGPDYLKE RTFDMKTMLR PHDGNFLFSI GRGIASKVVM FLPRNVDINE LAELSLSANP PWSLEVEKNY LNGKLKAITA YFCKPS
001: MGKVRGEVEE AEGEAIEALG SLFKLTQIHL WVDTDTPLFH QHSGNKSVDD TYGIANNGLM KEMNDLGLPV SFRTNKQWKN RTRGYQKKGF KDRLDEEVNV
101: ILKVEDTLNL VSALNEEVES PCFEEDCVQV IEVEEENHEV VVGSCFLGNG DGDSVLASET IDSHDSSVWK VYWDSFYGRS YFYNFKTQES KWEPPLGMEH
201: LAYSDESHNL SELVIEKHHD DLSGTVLGDD VPFDKADDLG GVCQSQLEAE ATEEVNSLID TYQETSIGNQ SLDITSLGEE GTGAYVVSSV RKAKKESRRS
301: RAKKKLLNSY TGTEMKGVPE EYSPILGKYW CQRYLLFSRF DEGIKMDEEG WFSVTPELIA KHHATRCNEG IVIDCFTGVG GNAIQFASRS HYVIAIDLDP
401: KKLDLAKHNA AIYGVADKID FVKGDFFDLA HNLKAGTVFL SPPWGGPDYL KASTYDMKTM LRPRDGDALF KAAMNIASTI IMFLPRNVDI NQLAELALST
501: SPPWSLEVEK NYLNGKLKAV TAYYVRQDDC KKLKRRPQ
101: ILKVEDTLNL VSALNEEVES PCFEEDCVQV IEVEEENHEV VVGSCFLGNG DGDSVLASET IDSHDSSVWK VYWDSFYGRS YFYNFKTQES KWEPPLGMEH
201: LAYSDESHNL SELVIEKHHD DLSGTVLGDD VPFDKADDLG GVCQSQLEAE ATEEVNSLID TYQETSIGNQ SLDITSLGEE GTGAYVVSSV RKAKKESRRS
301: RAKKKLLNSY TGTEMKGVPE EYSPILGKYW CQRYLLFSRF DEGIKMDEEG WFSVTPELIA KHHATRCNEG IVIDCFTGVG GNAIQFASRS HYVIAIDLDP
401: KKLDLAKHNA AIYGVADKID FVKGDFFDLA HNLKAGTVFL SPPWGGPDYL KASTYDMKTM LRPRDGDALF KAAMNIASTI IMFLPRNVDI NQLAELALST
501: SPPWSLEVEK NYLNGKLKAV TAYYVRQDDC KKLKRRPQ
Arabidopsis Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HRC0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.