Factsheet for GSMUA_Achr2P00940_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P30880_001	Banana	cytosol, mitochondrion, nucleus, plastid	34.12	43.4
TraesCS1A01G432300.1	Wheat	cytosol	45.4	35.92
TraesCS1B01G467900.1	Wheat	cytosol	43.92	35.84
AT1G45231.2	Thale cress	cytosol	45.4	28.44
CDY71252	Canola	cytosol	40.36	26.25
PGSC0003DMT400039918	Potato	cytosol	43.92	25.17
Bra040262.1-P	Field mustard	cytosol	42.14	24.83
CDY53935	Canola	cytosol	42.14	24.78
KXG39199	Sorghum	cytosol	46.88	23.65
Os03t0396900-02	Rice	cytosol	47.18	23.04
Zm00001d029429_P001	Maize	cytosol	46.29	22.94
Solyc12g088810.1.1	Tomato	cytosol, mitochondrion	45.4	22.3
TraesCS1B01G465400.2	Wheat	cytosol	47.18	21.81
HORVU1Hr1G093790.4	Barley	mitochondrion	47.77	21.55
TraesCS1D01G439800.1	Wheat	cytosol	46.88	21.5
KRH15371	Soybean	cytosol	44.51	20.95
CDY53955	Canola	cytosol	27.6	20.0
VIT_18s0001g10430.t01	Wine grape	cytosol	45.7	19.74
TraesCS1A01G430700.2	Wheat	cytosol	39.76	19.06
KRH05676	Soybean	endoplasmic reticulum	35.01	16.86

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.2	ncoils:Coil	GO:GO:0001510	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009409	GO:GO:0009452	GO:GO:0009628
GO:GO:0009987	GO:GO:0016740	GO:GO:0036261	GO:GO:0071164	EnsemblPlantsGene:GSMUA_Achr2G00940_001	EnsemblPlants:GSMUA_Achr2P00940_001
EnsemblPlants:GSMUA_Achr2T00940_001	UniProt:M0S435	PFAM:PF09445	PANTHER:PTHR14741	PANTHER:PTHR14741:SF33	InterPro:RNA_cap_Gua-N2-MeTrfase
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI000296175E	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G00940_001]

Coordinates

chr2:+:5602980..5611553

Molecular Weight (calculated)

37741.2 Da

IEP (calculated)

5.448

GRAVY (calculated)

-0.470

Length

337 amino acids

Sequence
(BLAST)

001: MLSDSSDKSN YVNCLGINRG SESFNTITNA KEVSEYLFSD HPTCINDNTR DELETLDKQA EKVTHDEASL EIPIQNCLIT SSDEIGYDGE GNEGSMTDEL
101: GNNYVSLNGK KKRRARRQKS EPKSPGVYEG VSASTFKYWC QRYSLFTRYD SGIKLDEEGW FSVTPEPIAR HHANRCGGGV VIDCFAGVGG NSIQFAIKSN
201: YVIAIDIDPQ KVEFAYHNST IYGVRDKIDF VQGDFFKMAA YMKGDSVFLS PPWGGPDYAK VQTYDIRSML KPHDGYHLFK IASRIASKVV IYLPRNVDFN
301: QLAELSLSVD PPWTLEVEKN ILNGRLKAVT AYFTSTS

Best Arabidopsis Sequence Match ( AT1G45231.2 )
(BLAST)

001: MGKVRGEVEE AEGEAIEALG SLFKLTQIHL WVDTDTPLFH QHSGNKSVDD TYGIANNGLM KEMNDLGLPV SFRTNKQWKN RTRGYQKKGF KDRLDEEVNV
101: ILKVEDTLNL VSALNEEVES PCFEEDCVQV IEVEEENHEV VVGSCFLGNG DGDSVLASET IDSHDSSVWK VYWDSFYGRS YFYNFKTQES KWEPPLGMEH
201: LAYSDESHNL SELVIEKHHD DLSGTVLGDD VPFDKADDLG GVCQSQLEAE ATEEVNSLID TYQETSIGNQ SLDITSLGEE GTGAYVVSSV RKAKKESRRS
301: RAKKKLLNSY TGTEMKGVPE EYSPILGKYW CQRYLLFSRF DEGIKMDEEG WFSVTPELIA KHHATRCNEG IVIDCFTGVG GNAIQFASRS HYVIAIDLDP
401: KKLDLAKHNA AIYGVADKID FVKGDFFDLA HNLKAGTVFL SPPWGGPDYL KASTYDMKTM LRPRDGDALF KAAMNIASTI IMFLPRNVDI NQLAELALST
501: SPPWSLEVEK NYLNGKLKAV TAYYVRQDDC KKLKRRPQ

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HRC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.