Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G430700.2 | Wheat | cytosol | 88.03 | 92.03 |
| TraesCS1B01G465400.2 | Wheat | cytosol | 91.16 | 91.91 |
| HORVU1Hr1G093790.4 | Barley | mitochondrion | 84.63 | 83.27 |
| Os03t0396900-02 | Rice | cytosol | 53.88 | 57.39 |
| KXG39199 | Sorghum | cytosol | 51.43 | 56.59 |
| Zm00001d029429_P001 | Maize | cytosol | 48.71 | 52.65 |
| GSMUA_Achr2P00940_001 | Banana | nucleus | 21.5 | 46.88 |
| AT1G45231.2 | Thale cress | cytosol | 26.8 | 36.62 |
| CDY71252 | Canola | cytosol | 25.44 | 36.1 |
| TraesCS7D01G153600.1 | Wheat | mitochondrion, plastid | 15.1 | 35.81 |
| PGSC0003DMT400039918 | Potato | cytosol | 26.94 | 33.67 |
| CDY53935 | Canola | cytosol | 25.44 | 32.64 |
| Bra040262.1-P | Field mustard | cytosol | 25.17 | 32.34 |
| CDY53955 | Canola | cytosol | 20.0 | 31.61 |
| Solyc12g088810.1.1 | Tomato | cytosol, mitochondrion | 28.84 | 30.9 |
| KRH15371 | Soybean | cytosol | 29.8 | 30.59 |
| VIT_18s0001g10430.t01 | Wine grape | cytosol | 30.61 | 28.85 |
| KRH05676 | Soybean | endoplasmic reticulum | 23.13 | 24.29 |
Protein Annotations
| Gene3D:2.20.70.10 | Gene3D:3.40.50.150 | MapMan:35.2 | GO:GO:0001510 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
| GO:GO:0009452 | GO:GO:0009987 | GO:GO:0016740 | InterPro:IPR001202 | PFAM:PF00397 | PFAM:PF09445 |
| ScanProsite:PS01159 | PFscan:PS50020 | PANTHER:PTHR14741 | PANTHER:PTHR14741:SF33 | InterPro:RNA_cap_Gua-N2-MeTrfase | InterPro:SAM-dependent_MTases |
| SUPFAM:SSF51045 | SUPFAM:SSF53335 | EnsemblPlantsGene:TraesCS1D01G439800 | EnsemblPlants:TraesCS1D01G439800.1 | InterPro:WW_dom | InterPro:WW_dom_sf |
| TIGR:cd00201 | TIGR:cd02440 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1D:+:485704239..485709376
Molecular Weight (calculated)
81592.0 Da
IEP (calculated)
4.402
GRAVY (calculated)
-0.641
Length
735 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATAAEEPQ EPRRDVDGEL SGAPAVGLDP GLGSWDAAPA REPVPTEMPP AAAAESSSIT KLGRLFRLTE VHLWDDFYAK PHDWRATDTA GCTGSQTAKT
101: RNKAAKQTDE DHSFVEDMEL ASLMGSLGLP VSFITRKEKK KTPAKGKHQG RQASYEAAST PMDDNVRTCT NSEELEHIQE SMDCMEQANS CVTSRAAAGY
201: SEVYHGDVDK TLGEESVNQC EPNDNMSSPV KSGSPVQENQ AADSFLQLNK VMLGQNCVDN ESIMSCAELC HEEKSSERED KISGETPPMS HDNNDPCPAE
301: PSPVNNHVEN SGSDFYYECG YWQVLWDQFY SRYYYYNIQT QESTWDPPQG LEDFVSYCST YSSQGIDEQV SQLTSTLVEE HNKINTKLDK SSGVLSCVKH
401: YISQPDEDAV QYGANASPCD NGETTFDQAG DDSHLDEQRH DLYSEAQSLS DIPDKESIYP SVIATIDEVQ DGENMQNDNS VAEVLEVNQE ATTTKKKKRV
501: RRSQSSHSCQ DLAENISNDI AKYWNQRYSL FSLFDSGIKM DEEGWFSVTP EPIAKHHASR VGAGILIDCF TGVGGNTIQF ATKCKHVVSV DIDPQKIDCA
601: QHNATVYGVN DHIDFIIGDF IHIAPHLKGE TVFMSPPWGG PDYAKVDVYD IKTMLKPCDG YHLFKVATAI ASRVVMFLPR NSDLDQLADM CLSIDPPWAV
701: EVEKNYLNGK LKAITAYFDK QDSIDENCIF REQHR
101: RNKAAKQTDE DHSFVEDMEL ASLMGSLGLP VSFITRKEKK KTPAKGKHQG RQASYEAAST PMDDNVRTCT NSEELEHIQE SMDCMEQANS CVTSRAAAGY
201: SEVYHGDVDK TLGEESVNQC EPNDNMSSPV KSGSPVQENQ AADSFLQLNK VMLGQNCVDN ESIMSCAELC HEEKSSERED KISGETPPMS HDNNDPCPAE
301: PSPVNNHVEN SGSDFYYECG YWQVLWDQFY SRYYYYNIQT QESTWDPPQG LEDFVSYCST YSSQGIDEQV SQLTSTLVEE HNKINTKLDK SSGVLSCVKH
401: YISQPDEDAV QYGANASPCD NGETTFDQAG DDSHLDEQRH DLYSEAQSLS DIPDKESIYP SVIATIDEVQ DGENMQNDNS VAEVLEVNQE ATTTKKKKRV
501: RRSQSSHSCQ DLAENISNDI AKYWNQRYSL FSLFDSGIKM DEEGWFSVTP EPIAKHHASR VGAGILIDCF TGVGGNTIQF ATKCKHVVSV DIDPQKIDCA
601: QHNATVYGVN DHIDFIIGDF IHIAPHLKGE TVFMSPPWGG PDYAKVDVYD IKTMLKPCDG YHLFKVATAI ASRVVMFLPR NSDLDQLADM CLSIDPPWAV
701: EVEKNYLNGK LKAITAYFDK QDSIDENCIF REQHR
001: MGKVRGEVEE AEGEAIEALG SLFKLTQIHL WVDTDTPLFH QHSGNKSVDD TYGIANNGLM KEMNDLGLPV SFRTNKQWKN RTRGYQKKGF KDRLDEEVNV
101: ILKVEDTLNL VSALNEEVES PCFEEDCVQV IEVEEENHEV VVGSCFLGNG DGDSVLASET IDSHDSSVWK VYWDSFYGRS YFYNFKTQES KWEPPLGMEH
201: LAYSDESHNL SELVIEKHHD DLSGTVLGDD VPFDKADDLG GVCQSQLEAE ATEEVNSLID TYQETSIGNQ SLDITSLGEE GTGAYVVSSV RKAKKESRRS
301: RAKKKLLNSY TGTEMKGVPE EYSPILGKYW CQRYLLFSRF DEGIKMDEEG WFSVTPELIA KHHATRCNEG IVIDCFTGVG GNAIQFASRS HYVIAIDLDP
401: KKLDLAKHNA AIYGVADKID FVKGDFFDLA HNLKAGTVFL SPPWGGPDYL KASTYDMKTM LRPRDGDALF KAAMNIASTI IMFLPRNVDI NQLAELALST
501: SPPWSLEVEK NYLNGKLKAV TAYYVRQDDC KKLKRRPQ
101: ILKVEDTLNL VSALNEEVES PCFEEDCVQV IEVEEENHEV VVGSCFLGNG DGDSVLASET IDSHDSSVWK VYWDSFYGRS YFYNFKTQES KWEPPLGMEH
201: LAYSDESHNL SELVIEKHHD DLSGTVLGDD VPFDKADDLG GVCQSQLEAE ATEEVNSLID TYQETSIGNQ SLDITSLGEE GTGAYVVSSV RKAKKESRRS
301: RAKKKLLNSY TGTEMKGVPE EYSPILGKYW CQRYLLFSRF DEGIKMDEEG WFSVTPELIA KHHATRCNEG IVIDCFTGVG GNAIQFASRS HYVIAIDLDP
401: KKLDLAKHNA AIYGVADKID FVKGDFFDLA HNLKAGTVFL SPPWGGPDYL KASTYDMKTM LRPRDGDALF KAAMNIASTI IMFLPRNVDI NQLAELALST
501: SPPWSLEVEK NYLNGKLKAV TAYYVRQDDC KKLKRRPQ
Arabidopsis Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HRC0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.