CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71252	Canola	cytosol	90.11	80.89
CDY53935	Canola	cytosol	83.87	68.06
AT1G45231.2	Thale cress	cytosol	53.33	46.1
CDX77588	Canola	cytosol	16.56	34.53
CDY05312	Canola	cytosol	14.41	34.01
CDY47154	Canola	nucleus	16.56	33.48
CDY12465	Canola	cytosol	16.34	33.04
GSMUA_Achr2P00940_001	Banana	nucleus	20.0	27.6
CDX98214	Canola	cytosol	17.63	26.97
TraesCS1A01G432300.1	Wheat	cytosol	21.51	23.47
TraesCS1B01G467900.1	Wheat	cytosol	20.43	23.0
KRH15371	Soybean	cytosol	34.84	22.63
PGSC0003DMT400039918	Potato	cytosol	28.17	22.28
KXG39199	Sorghum	cytosol	31.83	22.16
Zm00001d029429_P001	Maize	cytosol	30.97	21.18
VIT_18s0001g10430.t01	Wine grape	cytosol	35.48	21.15
Os03t0396900-02	Rice	cytosol	31.18	21.01
Solyc12g088810.1.1	Tomato	cytosol, mitochondrion	30.97	20.99
TraesCS1B01G465400.2	Wheat	cytosol	31.61	20.16
TraesCS1D01G439800.1	Wheat	cytosol	31.61	20.0
CDY02304	Canola	cytosol, mitochondrion, plasma membrane, plastid	7.1	19.88
HORVU1Hr1G093790.4	Barley	mitochondrion	30.97	19.28
TraesCS1A01G430700.2	Wheat	cytosol	27.31	18.07
KRH05676	Soybean	endoplasmic reticulum	24.3	16.14
CDY57504	Canola	nucleus, plastid	13.55	14.25

Protein Annotations

KEGG:00253+2.1.1.-	KEGG:00270+2.1.1.-	KEGG:00332+2.1.1.-	KEGG:00340+2.1.1.-	KEGG:00350+2.1.1.-	KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-	KEGG:00450+2.1.1.-	KEGG:00522+2.1.1.-	KEGG:00523+2.1.1.-	KEGG:00624+2.1.1.-	KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-	KEGG:00940+2.1.1.-	KEGG:00941+2.1.1.-	KEGG:00942+2.1.1.-	KEGG:00945+2.1.1.-	KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-	Gene3D:2.20.70.10	Gene3D:3.40.50.150	MapMan:35.2	GO:A0A078ISB3	UniProt:A0A078ISB3
EnsemblPlants:CDY53955	ProteinID:CDY53955	ProteinID:CDY53955.1	GO:GO:0001510	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0009452	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
EnsemblPlantsGene:GSBRNA2T00011803001	InterPro:IPR001202	PFAM:PF00397	PFAM:PF09445	ScanProsite:PS01159	PFscan:PS50020
PANTHER:PTHR14741	PANTHER:PTHR14741:SF33	InterPro:RNA_cap_Gua-N2-MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF51045	SUPFAM:SSF53335
TMHMM:TMhelix	UniParc:UPI0004EE69D2	InterPro:WW_dom	InterPro:WW_dom_sf	SEG:seg	:

Description

BnaCnng25810DBnaCnng25810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ISB3]

Coordinates

chrLK033256:-:5153..7410

Molecular Weight (calculated)

52190.1 Da

IEP (calculated)

4.705

GRAVY (calculated)

-0.417

Length

465 amino acids

Sequence
(BLAST)

001: MGMVGSEVEE ESASIKALGS LFKLTQIHLW EDGSTDTCLV PLFHEHNRFE DMGLIQEMKA LGLPVAFQTN KEWKNRTKSI PQKKRIKDRS DQVNVDVASP
101: QSLLVSDCSP HHAIGGDEEV DGSSVENDCV QISAVEQNDE VACLGDGDRD SLLTSEATDS RSYELGDEHG SSEWKVYWDS FYGRNYFYNV MTQESTWQPP
201: LGMEHLAYSH ETHNLNEFPT EKQPDDLLRN LPADDVPPEQ SDDLGGVCQS QHETKTLEEV SSLIDTYQET SIGNQLLDVT TLEEEGNGTS VVKTIKKAKK
301: KTRRSRAKKI FSCSNTAGVP DEYSDVLGKY WCQRYLLFSR FDESIKMDEE GWFSVTPEAI AKHHASRGSG GVVIDCFTGV GGNAIQFASR SHYVIAIDLD
401: PKKLDLAKHN AAVYGVADKI DFVKGDFFDL AHNLKVFFLQ LVSFFFWWIV IKKGIPIWIL SMIGF

Best Arabidopsis Sequence Match ( AT1G45231.2 )
(BLAST)

001: MGKVRGEVEE AEGEAIEALG SLFKLTQIHL WVDTDTPLFH QHSGNKSVDD TYGIANNGLM KEMNDLGLPV SFRTNKQWKN RTRGYQKKGF KDRLDEEVNV
101: ILKVEDTLNL VSALNEEVES PCFEEDCVQV IEVEEENHEV VVGSCFLGNG DGDSVLASET IDSHDSSVWK VYWDSFYGRS YFYNFKTQES KWEPPLGMEH
201: LAYSDESHNL SELVIEKHHD DLSGTVLGDD VPFDKADDLG GVCQSQLEAE ATEEVNSLID TYQETSIGNQ SLDITSLGEE GTGAYVVSSV RKAKKESRRS
301: RAKKKLLNSY TGTEMKGVPE EYSPILGKYW CQRYLLFSRF DEGIKMDEEG WFSVTPELIA KHHATRCNEG IVIDCFTGVG GNAIQFASRS HYVIAIDLDP
401: KKLDLAKHNA AIYGVADKID FVKGDFFDLA HNLKAGTVFL SPPWGGPDYL KASTYDMKTM LRPRDGDALF KAAMNIASTI IMFLPRNVDI NQLAELALST
501: SPPWSLEVEK NYLNGKLKAV TAYYVRQDDC KKLKRRPQ

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HRC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.