Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g088810.1.1 | Tomato | cytosol, mitochondrion | 92.01 | 78.86 |
| PGSC0003DMT400032794 | Potato | cytosol, mitochondrion | 20.75 | 49.8 |
| GSMUA_Achr2P00940_001 | Banana | nucleus | 25.17 | 43.92 |
| AT1G45231.2 | Thale cress | cytosol | 33.67 | 36.8 |
| CDY71252 | Canola | cytosol | 30.27 | 34.36 |
| TraesCS1A01G432300.1 | Wheat | cytosol | 23.98 | 33.1 |
| TraesCS1B01G467900.1 | Wheat | cytosol | 22.79 | 32.45 |
| Bra040262.1-P | Field mustard | cytosol | 30.78 | 31.64 |
| CDY53935 | Canola | cytosol | 30.61 | 31.41 |
| VIT_18s0001g10430.t01 | Wine grape | cytosol | 40.65 | 30.64 |
| KRH15371 | Soybean | cytosol | 37.24 | 30.59 |
| KXG39199 | Sorghum | cytosol | 33.84 | 29.79 |
| Os03t0396900-02 | Rice | cytosol | 34.86 | 29.71 |
| Zm00001d029429_P001 | Maize | cytosol | 33.84 | 29.26 |
| CDY53955 | Canola | cytosol | 22.28 | 28.17 |
| TraesCS1B01G465400.2 | Wheat | cytosol | 34.18 | 27.57 |
| TraesCS1D01G439800.1 | Wheat | cytosol | 33.67 | 26.94 |
| HORVU1Hr1G093790.4 | Barley | mitochondrion | 32.82 | 25.84 |
| KRH05676 | Soybean | endoplasmic reticulum | 30.44 | 25.57 |
| TraesCS1A01G430700.2 | Wheat | cytosol | 30.44 | 25.46 |
Protein Annotations
| Gene3D:2.20.70.10 | Gene3D:3.40.50.150 | MapMan:35.2 | GO:GO:0001510 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009409 |
| GO:GO:0009452 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0036261 | GO:GO:0071164 |
| InterPro:IPR001202 | UniProt:M1B8Y9 | PFAM:PF09445 | EnsemblPlantsGene:PGSC0003DMG400015440 | PGSC:PGSC0003DMG400015440 | EnsemblPlants:PGSC0003DMT400039918 |
| PFscan:PS50020 | PANTHER:PTHR14741 | PANTHER:PTHR14741:SF33 | InterPro:RNA_cap_Gua-N2-MeTrfase | InterPro:SAM-dependent_MTases | SUPFAM:SSF53335 |
| UniParc:UPI000295A6B8 | InterPro:WW_dom | SEG:seg | : | : | : |
Description
SAM (And some other nucleotide) binding motif; WW/Rsp5/WWP [Source:PGSC_GENE;Acc:PGSC0003DMG400015440]
Coordinates
chr12:-:56618612..56625106
Molecular Weight (calculated)
65427.3 Da
IEP (calculated)
4.427
GRAVY (calculated)
-0.508
Length
588 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLPVSFHTN KEQKRNRTVK GKRKDGKKKS LSSCEITQDE VLTSIQELKE ECESIGTLHG NSNKDSSCLS LLGQSEFSSF YTGDGDFHCL DGGKEGLNNL
101: NADSAHTSLE CIACNQQSGL SLDNTTDNVS ISEKVQLEKD VGVMVGSSLE CGNHAESCPI NSNVDSRWIS GETLNGHCEG NPLNGEQIEY ACMECSLSGE
201: QVESIAMQTA EHHTEDGLLC NVVGEELNNC NATNNNCEGT TNDWRFYWDN DYQRNYFYNT VTTQCTWDPP PGMDDLIFTS FTTKQPETAL EMELDEADLE
301: ESNDLQTSAS LPSELDIADG FIEDDVLLDR QLNESEGAGQ FADNLCTLSS TKQKKRVRKT KSKWKLPTEA QELEFCNTNE EISPSLNKYW CQRYLLFNKY
401: DDGIKMDGEG WFSVTPEAIA KHHALRCGSG TIVDFFTGVG GNSIQFAMRS KHVIAIDIDP KRIDLAQYNA AIYGVCDQID FIRGDSFVLA PNLKADVVFM
501: SPPWGGPDYL KERTFDMKTM LRPHDGNFLF SIGRGIASKV VMFLPRNVDI NELAELSLSA NPPWLLEVEK NYLNGKLKAI TAYFCKPS
101: NADSAHTSLE CIACNQQSGL SLDNTTDNVS ISEKVQLEKD VGVMVGSSLE CGNHAESCPI NSNVDSRWIS GETLNGHCEG NPLNGEQIEY ACMECSLSGE
201: QVESIAMQTA EHHTEDGLLC NVVGEELNNC NATNNNCEGT TNDWRFYWDN DYQRNYFYNT VTTQCTWDPP PGMDDLIFTS FTTKQPETAL EMELDEADLE
301: ESNDLQTSAS LPSELDIADG FIEDDVLLDR QLNESEGAGQ FADNLCTLSS TKQKKRVRKT KSKWKLPTEA QELEFCNTNE EISPSLNKYW CQRYLLFNKY
401: DDGIKMDGEG WFSVTPEAIA KHHALRCGSG TIVDFFTGVG GNSIQFAMRS KHVIAIDIDP KRIDLAQYNA AIYGVCDQID FIRGDSFVLA PNLKADVVFM
501: SPPWGGPDYL KERTFDMKTM LRPHDGNFLF SIGRGIASKV VMFLPRNVDI NELAELSLSA NPPWLLEVEK NYLNGKLKAI TAYFCKPS
001: MGKVRGEVEE AEGEAIEALG SLFKLTQIHL WVDTDTPLFH QHSGNKSVDD TYGIANNGLM KEMNDLGLPV SFRTNKQWKN RTRGYQKKGF KDRLDEEVNV
101: ILKVEDTLNL VSALNEEVES PCFEEDCVQV IEVEEENHEV VVGSCFLGNG DGDSVLASET IDSHDSSVWK VYWDSFYGRS YFYNFKTQES KWEPPLGMEH
201: LAYSDESHNL SELVIEKHHD DLSGTVLGDD VPFDKADDLG GVCQSQLEAE ATEEVNSLID TYQETSIGNQ SLDITSLGEE GTGAYVVSSV RKAKKESRRS
301: RAKKKLLNSY TGTEMKGVPE EYSPILGKYW CQRYLLFSRF DEGIKMDEEG WFSVTPELIA KHHATRCNEG IVIDCFTGVG GNAIQFASRS HYVIAIDLDP
401: KKLDLAKHNA AIYGVADKID FVKGDFFDLA HNLKAGTVFL SPPWGGPDYL KASTYDMKTM LRPRDGDALF KAAMNIASTI IMFLPRNVDI NQLAELALST
501: SPPWSLEVEK NYLNGKLKAV TAYYVRQDDC KKLKRRPQ
101: ILKVEDTLNL VSALNEEVES PCFEEDCVQV IEVEEENHEV VVGSCFLGNG DGDSVLASET IDSHDSSVWK VYWDSFYGRS YFYNFKTQES KWEPPLGMEH
201: LAYSDESHNL SELVIEKHHD DLSGTVLGDD VPFDKADDLG GVCQSQLEAE ATEEVNSLID TYQETSIGNQ SLDITSLGEE GTGAYVVSSV RKAKKESRRS
301: RAKKKLLNSY TGTEMKGVPE EYSPILGKYW CQRYLLFSRF DEGIKMDEEG WFSVTPELIA KHHATRCNEG IVIDCFTGVG GNAIQFASRS HYVIAIDLDP
401: KKLDLAKHNA AIYGVADKID FVKGDFFDLA HNLKAGTVFL SPPWGGPDYL KASTYDMKTM LRPRDGDALF KAAMNIASTI IMFLPRNVDI NQLAELALST
501: SPPWSLEVEK NYLNGKLKAV TAYYVRQDDC KKLKRRPQ
Arabidopsis Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HRC0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.