Factsheet for Bra040262.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53935	Canola	cytosol	98.6	98.43
AT1G45231.2	Thale cress	cytosol	56.99	60.59
Bra026224.1-P	Field mustard	cytosol	20.45	52.47
Bra039862.1-P	Field mustard	cytosol	20.98	52.17
GSMUA_Achr2P00940_001	Banana	nucleus	24.83	42.14
Bra014884.1-P	Field mustard	cytosol	20.1	42.12
TraesCS1A01G432300.1	Wheat	cytosol	24.65	33.1
TraesCS1B01G467900.1	Wheat	cytosol	23.78	32.93
PGSC0003DMT400039918	Potato	cytosol	31.64	30.78
KRH15371	Soybean	cytosol	36.89	29.47
Solyc12g088810.1.1	Tomato	cytosol, mitochondrion	33.92	28.28
KXG39199	Sorghum	cytosol	32.87	28.14
VIT_18s0001g10430.t01	Wine grape	cytosol	38.11	27.95
Os03t0396900-02	Rice	cytosol	33.22	27.54
Zm00001d029429_P001	Maize	cytosol	32.69	27.5
TraesCS1B01G465400.2	Wheat	cytosol	32.17	25.24
TraesCS1D01G439800.1	Wheat	cytosol	32.34	25.17
HORVU1Hr1G093790.4	Barley	mitochondrion	31.47	24.1
TraesCS1A01G430700.2	Wheat	cytosol	29.2	23.76
KRH05676	Soybean	endoplasmic reticulum	27.97	22.86

Protein Annotations

Gene3D:2.20.70.10	Gene3D:3.40.50.150	MapMan:35.2	EnsemblPlantsGene:Bra040262	EnsemblPlants:Bra040262.1	EnsemblPlants:Bra040262.1-P
GO:GO:0001510	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0009409	GO:GO:0009452	GO:GO:0009628	GO:GO:0009987
GO:GO:0016740	GO:GO:0036261	GO:GO:0071164	InterPro:IPR001202	UniProt:M4FGN4	PFAM:PF00397
PFAM:PF09445	ScanProsite:PS01159	PFscan:PS50020	PANTHER:PTHR14741	PANTHER:PTHR14741:SF33	InterPro:RNA_cap_Gua-N2-MeTrfase
InterPro:SAM-dependent_MTases	SMART:SM00456	SUPFAM:SSF51045	SUPFAM:SSF53335	UniParc:UPI000253EC11	InterPro:WW_dom
InterPro:WW_dom_sf	SEG:seg	:	:	:	:

Description

AT1G45231 (E=1e-183) | WW domain-containing protein

Coordinates

chrScaffold000193:+:91424..94164

Molecular Weight (calculated)

63923.3 Da

IEP (calculated)

4.758

GRAVY (calculated)

-0.398

Length

572 amino acids

Sequence
(BLAST)

001: MGMVGSEEKE GASIKALGSL FKLTQIHLWE DGSTDTRLVP LFHEHNRFED MGLIQEMKAL GLPVAFQTNK EWKNRTKSIH QKKRIKDRSD EVNVDVASPL
101: SLFVSDCSPH HAIGGDEEVG APCVENDCVQ ISAVEQYDEV ACLGDGDRDS LLTSDATDSQ SYELGDEHGS SEWKVYWDSF YGRNYFYNVI TQESTWQPPL
201: EMEHLAYSHE THNLNELPIE ATEKQPDDLL GESPVVDVPA EQSDDLGGVC QSQCETKSLE EVSSLIDTYQ ETSIGNQLLD ITTLEEEGNG TSVVKSIKKA
301: KKKTRRTRAK KIFSCSNTGV PDEYSDVLGK YWCQRYLLFS RFDEGIKMDE EGWFSVTPEA IANHHASRCS GGVVIDCFTG VGGNAIQFAS RSHYVIAIDL
401: DPKKLDLAKH NAAVYGVADK IDFVKGDFFD LAHNLKAGTV FLSPPWGGPD YLKASTYDMK TMLRPRDGDA LFTAAMNIAS TVIMFLPRNV DINQLAELAL
501: STSPPWSLEA SRKELLKWEA EGNNSILLQT RWLLKLRIRQ RFFSPINERM PHVSAFVSAC GIQVKMTMDL ES

Best Arabidopsis Sequence Match ( AT1G45231.2 )
(BLAST)

001: MGKVRGEVEE AEGEAIEALG SLFKLTQIHL WVDTDTPLFH QHSGNKSVDD TYGIANNGLM KEMNDLGLPV SFRTNKQWKN RTRGYQKKGF KDRLDEEVNV
101: ILKVEDTLNL VSALNEEVES PCFEEDCVQV IEVEEENHEV VVGSCFLGNG DGDSVLASET IDSHDSSVWK VYWDSFYGRS YFYNFKTQES KWEPPLGMEH
201: LAYSDESHNL SELVIEKHHD DLSGTVLGDD VPFDKADDLG GVCQSQLEAE ATEEVNSLID TYQETSIGNQ SLDITSLGEE GTGAYVVSSV RKAKKESRRS
301: RAKKKLLNSY TGTEMKGVPE EYSPILGKYW CQRYLLFSRF DEGIKMDEEG WFSVTPELIA KHHATRCNEG IVIDCFTGVG GNAIQFASRS HYVIAIDLDP
401: KKLDLAKHNA AIYGVADKID FVKGDFFDLA HNLKAGTVFL SPPWGGPDYL KASTYDMKTM LRPRDGDALF KAAMNIASTI IMFLPRNVDI NQLAELALST
501: SPPWSLEVEK NYLNGKLKAV TAYYVRQDDC KKLKRRPQ

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HRC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.