Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71252 | Canola | cytosol | 59.48 | 61.78 |
| Bra040262.1-P | Field mustard | cytosol | 60.59 | 56.99 |
| CDY53935 | Canola | cytosol | 60.22 | 56.54 |
| CDY53955 | Canola | cytosol | 46.1 | 53.33 |
| AT1G30545.2 | Thale cress | mitochondrion | 22.3 | 51.5 |
| AT1G30550.2 | Thale cress | extracellular | 22.12 | 49.79 |
| GSMUA_Achr2P00940_001 | Banana | nucleus | 28.44 | 45.4 |
| TraesCS1B01G467900.1 | Wheat | cytosol | 28.07 | 36.56 |
| TraesCS1A01G432300.1 | Wheat | cytosol | 28.62 | 36.15 |
| PGSC0003DMT400039918 | Potato | cytosol | 36.8 | 33.67 |
| KRH15371 | Soybean | cytosol | 40.71 | 30.59 |
| Solyc12g088810.1.1 | Tomato | cytosol, mitochondrion | 38.66 | 30.32 |
| KXG39199 | Sorghum | cytosol | 37.36 | 30.09 |
| Os03t0396900-02 | Rice | cytosol | 38.1 | 29.71 |
| VIT_18s0001g10430.t01 | Wine grape | cytosol | 42.75 | 29.49 |
| Zm00001d029429_P001 | Maize | cytosol | 36.62 | 28.97 |
| TraesCS1D01G439800.1 | Wheat | cytosol | 36.62 | 26.8 |
| TraesCS1B01G465400.2 | Wheat | cytosol | 35.69 | 26.34 |
| HORVU1Hr1G093790.4 | Barley | mitochondrion | 36.25 | 26.1 |
| TraesCS1A01G430700.2 | Wheat | cytosol | 32.9 | 25.18 |
| KRH05676 | Soybean | endoplasmic reticulum | 31.23 | 24.0 |
Protein Annotations
| Gene3D:2.20.70.10 | Gene3D:3.40.50.150 | MapMan:35.2 | EntrezGene:841092 | ProteinID:AEE32102.1 | ArrayExpress:AT1G45231 |
| EnsemblPlantsGene:AT1G45231 | RefSeq:AT1G45231 | TAIR:AT1G45231 | RefSeq:AT1G45231-TAIR-G | EnsemblPlants:AT1G45231.2 | TAIR:AT1G45231.2 |
| Unigene:At.52040 | UniProt:F4HRC0 | GO:GO:0001510 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009409 | GO:GO:0009452 |
| GO:GO:0009628 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0032259 | GO:GO:0036261 | GO:GO:0071164 |
| InterPro:IPR001202 | RefSeq:NP_973978.2 | PFAM:PF00397 | PFAM:PF09445 | PO:PO:0000293 | PFscan:PS50020 |
| PANTHER:PTHR14741 | PANTHER:PTHR14741:SF33 | InterPro:RNA_cap_Gua-N2-MeTrfase | InterPro:SAM-dependent_MTases | SUPFAM:SSF51045 | SUPFAM:SSF53335 |
| UniParc:UPI0001E92AAA | InterPro:WW_dom | InterPro:WW_dom_sf | SEG:seg | : | : |
Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HRC0]
Coordinates
chr1:-:17147707..17151211
Molecular Weight (calculated)
60406.0 Da
IEP (calculated)
4.762
GRAVY (calculated)
-0.463
Length
538 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKVRGEVEE AEGEAIEALG SLFKLTQIHL WVDTDTPLFH QHSGNKSVDD TYGIANNGLM KEMNDLGLPV SFRTNKQWKN RTRGYQKKGF KDRLDEEVNV
101: ILKVEDTLNL VSALNEEVES PCFEEDCVQV IEVEEENHEV VVGSCFLGNG DGDSVLASET IDSHDSSVWK VYWDSFYGRS YFYNFKTQES KWEPPLGMEH
201: LAYSDESHNL SELVIEKHHD DLSGTVLGDD VPFDKADDLG GVCQSQLEAE ATEEVNSLID TYQETSIGNQ SLDITSLGEE GTGAYVVSSV RKAKKESRRS
301: RAKKKLLNSY TGTEMKGVPE EYSPILGKYW CQRYLLFSRF DEGIKMDEEG WFSVTPELIA KHHATRCNEG IVIDCFTGVG GNAIQFASRS HYVIAIDLDP
401: KKLDLAKHNA AIYGVADKID FVKGDFFDLA HNLKAGTVFL SPPWGGPDYL KASTYDMKTM LRPRDGDALF KAAMNIASTI IMFLPRNVDI NQLAELALST
501: SPPWSLEVEK NYLNGKLKAV TAYYVRQDDC KKLKRRPQ
101: ILKVEDTLNL VSALNEEVES PCFEEDCVQV IEVEEENHEV VVGSCFLGNG DGDSVLASET IDSHDSSVWK VYWDSFYGRS YFYNFKTQES KWEPPLGMEH
201: LAYSDESHNL SELVIEKHHD DLSGTVLGDD VPFDKADDLG GVCQSQLEAE ATEEVNSLID TYQETSIGNQ SLDITSLGEE GTGAYVVSSV RKAKKESRRS
301: RAKKKLLNSY TGTEMKGVPE EYSPILGKYW CQRYLLFSRF DEGIKMDEEG WFSVTPELIA KHHATRCNEG IVIDCFTGVG GNAIQFASRS HYVIAIDLDP
401: KKLDLAKHNA AIYGVADKID FVKGDFFDLA HNLKAGTVFL SPPWGGPDYL KASTYDMKTM LRPRDGDALF KAAMNIASTI IMFLPRNVDI NQLAELALST
501: SPPWSLEVEK NYLNGKLKAV TAYYVRQDDC KKLKRRPQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.