CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040262.1-P	Field mustard	cytosol	98.43	98.6
CDY71252	Canola	cytosol	80.45	89.0
CDY53955	Canola	cytosol	68.06	83.87
AT1G45231.2	Thale cress	cytosol	56.54	60.22
CDY47154	Canola	nucleus	20.94	52.17
CDX77588	Canola	cytosol	20.24	52.02
CDY05312	Canola	cytosol	17.63	51.27
CDY12465	Canola	cytosol	20.42	50.87
GSMUA_Achr2P00940_001	Banana	nucleus	24.78	42.14
CDX98214	Canola	cytosol	21.12	39.8
CDY02304	Canola	cytosol, mitochondrion, plasma membrane, plastid	10.99	37.95
TraesCS1A01G432300.1	Wheat	cytosol	24.78	33.33
TraesCS1B01G467900.1	Wheat	cytosol	23.91	33.17
PGSC0003DMT400039918	Potato	cytosol	31.41	30.61
KRH15371	Soybean	cytosol	36.82	29.47
KXG39199	Sorghum	cytosol	32.81	28.14
Solyc12g088810.1.1	Tomato	cytosol, mitochondrion	33.68	28.13
VIT_18s0001g10430.t01	Wine grape	cytosol	37.87	27.82
Os03t0396900-02	Rice	cytosol	33.33	27.68
Zm00001d029429_P001	Maize	cytosol	32.64	27.5
TraesCS1B01G465400.2	Wheat	cytosol	32.46	25.51
TraesCS1D01G439800.1	Wheat	cytosol	32.64	25.44
HORVU1Hr1G093790.4	Barley	mitochondrion	31.76	24.36
TraesCS1A01G430700.2	Wheat	cytosol	29.32	23.9
KRH05676	Soybean	endoplasmic reticulum	27.92	22.86
CDY57504	Canola	nucleus, plastid	17.63	22.85

Protein Annotations

KEGG:00253+2.1.1.-	KEGG:00270+2.1.1.-	KEGG:00332+2.1.1.-	KEGG:00340+2.1.1.-	KEGG:00350+2.1.1.-	KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-	KEGG:00450+2.1.1.-	KEGG:00522+2.1.1.-	KEGG:00523+2.1.1.-	KEGG:00624+2.1.1.-	KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-	KEGG:00940+2.1.1.-	KEGG:00941+2.1.1.-	KEGG:00942+2.1.1.-	KEGG:00945+2.1.1.-	KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-	Gene3D:2.20.70.10	Gene3D:3.40.50.150	MapMan:35.2	GO:A0A078IS96	UniProt:A0A078IS96
EnsemblPlants:CDY53935	ProteinID:CDY53935	ProteinID:CDY53935.1	GO:GO:0001510	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009452	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00011724001	InterPro:IPR001202	PFAM:PF00397
PFAM:PF09445	ScanProsite:PS01159	PFscan:PS50020	PANTHER:PTHR14741	PANTHER:PTHR14741:SF33	InterPro:RNA_cap_Gua-N2-MeTrfase
InterPro:SAM-dependent_MTases	SMART:SM00456	SUPFAM:SSF51045	SUPFAM:SSF53335	UniParc:UPI0004EF2300	InterPro:WW_dom
InterPro:WW_dom_sf	SEG:seg	:	:	:	:

Description

BnaA10g28550DBnaA10g28550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IS96]

Coordinates

chrLK033253:-:58158..61182

Molecular Weight (calculated)

64005.4 Da

IEP (calculated)

4.797

GRAVY (calculated)

-0.392

Length

573 amino acids

Sequence
(BLAST)

001: MGMVGSEEKE GASIKALGSL FKLTQIHLWE DGSTDTRLVP LFHEHNRFED MGLIQEMKAL GLPVAFQTNK EWKNRTKSIH QKKRIKDRSD EVNVDVASPL
101: SLFVSDCSPH HAIGGDEEVD APCVENDCVQ ISAVEQYDEV ACLGDGDRDS LLTSDATDSQ SYELGDEHGS SEWKVYWDSF YGRNYFYNVI TQESTWQPPL
201: EMEHLAYSHE THNLNGLPIE ATEKQPDDLL GESPVVDVPA EQSDDLGGVC QSQCETKSLE EVSSLIDTYQ ETSIGNQLLD ITTLEEEGNG TSVVKSIKKA
301: KKKTRRTRAK KIFSCSNTAG VPDEYSDVLG KYWCQRYLLF SRFDEGIKMD EEGWFSVTPE AIAKHHASRC SGGVVIDCFT GVGGNAIQFA SRSHYVIAID
401: LDPKKLDLAK HNAAVYGVAD KIDFVKGDFF ELAHNLKAGT VFLSPPWGGP DYLKASTYDM KTMLRPRDGD ALFTAAMNIA STVIMFLPRN VDINQLAELA
501: LSTSPPWSLE ASRKELLKWE AEGNNSILLQ TRWLLKLRIR PRFFSPINER MPHVSAFVSA CGIQVRMTMD LES

Best Arabidopsis Sequence Match ( AT1G45231.2 )
(BLAST)

001: MGKVRGEVEE AEGEAIEALG SLFKLTQIHL WVDTDTPLFH QHSGNKSVDD TYGIANNGLM KEMNDLGLPV SFRTNKQWKN RTRGYQKKGF KDRLDEEVNV
101: ILKVEDTLNL VSALNEEVES PCFEEDCVQV IEVEEENHEV VVGSCFLGNG DGDSVLASET IDSHDSSVWK VYWDSFYGRS YFYNFKTQES KWEPPLGMEH
201: LAYSDESHNL SELVIEKHHD DLSGTVLGDD VPFDKADDLG GVCQSQLEAE ATEEVNSLID TYQETSIGNQ SLDITSLGEE GTGAYVVSSV RKAKKESRRS
301: RAKKKLLNSY TGTEMKGVPE EYSPILGKYW CQRYLLFSRF DEGIKMDEEG WFSVTPELIA KHHATRCNEG IVIDCFTGVG GNAIQFASRS HYVIAIDLDP
401: KKLDLAKHNA AIYGVADKID FVKGDFFDLA HNLKAGTVFL SPPWGGPDYL KASTYDMKTM LRPRDGDALF KAAMNIASTI IMFLPRNVDI NQLAELALST
501: SPPWSLEVEK NYLNGKLKAV TAYYVRQDDC KKLKRRPQ

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HRC0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.