CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12465	Canola	cytosol	30.77	59.13
CDY47154	Canola	nucleus	30.54	58.7
CDX77588	Canola	cytosol	26.24	52.02
CDY02304	Canola	cytosol, mitochondrion, plasma membrane, plastid	19.46	51.81
AT1G30545.2	Thale cress	mitochondrion	26.7	50.64
CDY05312	Canola	cytosol	21.27	47.72
VIT_09s0018g01550.t01	Wine grape	cytosol	24.21	43.15
PGSC0003DMT400032794	Potato	cytosol, mitochondrion	23.53	42.45
Solyc01g104990.2.1	Tomato	cytosol	22.85	41.74
CDX98214	Canola	cytosol	28.51	41.45
GSMUA_Achr6P30880_001	Banana	cytosol, mitochondrion, nucleus, plastid	24.43	40.75
TraesCS7A01G151900.1	Wheat	cytosol	16.97	39.47
OQU75980	Sorghum	mitochondrion	22.17	32.78
TraesCS7D01G153600.1	Wheat	mitochondrion, plastid	22.62	32.26
TraesCS7B01G055700.1	Wheat	cytosol, plastid	22.85	30.61
Zm00001d045079_P001	Maize	mitochondrion	22.17	29.08
CDY71252	Canola	cytosol	22.4	19.11
CDY53935	Canola	cytosol	22.85	17.63
CDY53955	Canola	cytosol	14.25	13.55

Protein Annotations

KEGG:00253+2.1.1.-	KEGG:00270+2.1.1.-	KEGG:00332+2.1.1.-	KEGG:00340+2.1.1.-	KEGG:00350+2.1.1.-	KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-	KEGG:00450+2.1.1.-	KEGG:00522+2.1.1.-	KEGG:00523+2.1.1.-	KEGG:00624+2.1.1.-	KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-	KEGG:00940+2.1.1.-	KEGG:00941+2.1.1.-	KEGG:00942+2.1.1.-	KEGG:00945+2.1.1.-	KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-	Gene3D:3.40.50.150	MapMan:35.2	GO:A0A078IYX8	UniProt:A0A078IYX8	EnsemblPlants:CDY57504
ProteinID:CDY57504	ProteinID:CDY57504.1	ncoils:Coil	GO:GO:0001510	GO:GO:0003674	GO:GO:0003824
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009452	GO:GO:0009987
GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00022288001	PFAM:PF09445	PANTHER:PTHR14741	PANTHER:PTHR14741:SF33	InterPro:RNA_cap_Gua-N2-MeTrfase
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0004EF21AE	SEG:seg	:	:

Description

BnaC07g48690DBnaC07g48690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYX8]

Coordinates

chrLK033582:-:1004..2989

Molecular Weight (calculated)

50313.6 Da

IEP (calculated)

9.901

GRAVY (calculated)

-0.526

Length

442 amino acids

Sequence
(BLAST)

001: MVKKKSKKEK GGSSLKNSDA AAAVSLKNSD AAAASLKNSD AAAAASTSMR FESDEEKARL LFSERLISMI KGDEISLRFK NYISKFYTKE EMQQAENDLI
101: DKSDRMDKNE TKYIYQRLTK AVNNTIRLNG YERFAKKCAE ERDLEEAHKK RFGAAEIELW TGEPQTNKKK KKPKKKDTPV VSYSSRGDLC TEKEQSTSLN
201: LSSKYRQQRY KLFSLYDKGV GGNTIQFTKV CSSVIAIDID PLKIKMAVNN ATVYGVVDRV DYVVGDFINL ALKADILFLS PPWGGPMYNK VGRYTLDIIQ
301: PKDGQHIHVI LYSLFRIARS ITPNIIMFLP RNIDLEQLEE LARLSSPPLT LEIEENYVQG KIKAIKAYFS CSAKKNLTFH LSESPTELES DLRQVLKIVQ
401: NSETTIKKLV LDLEASFDRK MDKLTKEIKE IKTLISRFNT RW

Best Arabidopsis Sequence Match ( AT1G30545.1 )
(BLAST)

001: MNNAMVYGVA NRVDFVIGDF IQLAPSLKGD VVFLSPPWGG PMYRDFESYN LDMLQPRDGY SLFQIAQSIT PNIIMFLPRN VDLAQVEELA WLSSPPLNLE
101: IEENFVGGRM KAVTAYFSCN AV

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8ASE3]
SUBAcon: [plastid,extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.