CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77588	Canola	cytosol	68.09	92.83
CDY05312	Canola	cytosol	55.26	85.28
CDY47154	Canola	nucleus	53.95	71.3
CDY12465	Canola	cytosol	53.62	70.87
AT1G30550.2	Thale cress	extracellular	55.26	70.29
PGSC0003DMT400032794	Potato	cytosol, mitochondrion	43.75	54.29
Solyc01g104990.2.1	Tomato	cytosol	42.76	53.72
CDY02304	Canola	cytosol, mitochondrion, plasma membrane, plastid	28.95	53.01
VIT_09s0018g01550.t01	Wine grape	cytosol	43.09	52.82
TraesCS7A01G151900.1	Wheat	cytosol	29.61	47.37
GSMUA_Achr6P30880_001	Banana	cytosol, mitochondrion, nucleus, plastid	40.13	46.04
OQU75980	Sorghum	mitochondrion	35.53	36.12
TraesCS7D01G153600.1	Wheat	mitochondrion, plastid	36.18	35.48
TraesCS7B01G055700.1	Wheat	cytosol, plastid	37.5	34.55
Zm00001d045079_P001	Maize	mitochondrion	35.53	32.05
CDY57504	Canola	nucleus, plastid	41.45	28.51
CDY71252	Canola	cytosol	38.16	22.39
CDY53935	Canola	cytosol	39.8	21.12
CDY53955	Canola	cytosol	26.97	17.63

Protein Annotations

KEGG:00253+2.1.1.-	KEGG:00270+2.1.1.-	KEGG:00332+2.1.1.-	KEGG:00340+2.1.1.-	KEGG:00350+2.1.1.-	KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-	KEGG:00450+2.1.1.-	KEGG:00522+2.1.1.-	KEGG:00523+2.1.1.-	KEGG:00624+2.1.1.-	KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-	KEGG:00940+2.1.1.-	KEGG:00941+2.1.1.-	KEGG:00942+2.1.1.-	KEGG:00945+2.1.1.-	KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-	Gene3D:3.40.50.150	MapMan:35.2	GO:A0A078EBQ7	EnsemblPlants:CDX98214	ProteinID:CDX98214
ProteinID:CDX98214.1	GO:GO:0001510	GO:GO:0003674	GO:GO:0003824	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0009452	GO:GO:0009987	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00105691001
PFAM:PF09445	PANTHER:PTHR14741	InterPro:RNA_cap_Gua-N2-MeTrfase	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI0004EEBFB0
SEG:seg	:	:	:	:	:

Description

BnaC07g08840D

Coordinates

chrLK031903:-:862870..864676

Molecular Weight (calculated)

34349.1 Da

IEP (calculated)

4.860

GRAVY (calculated)

-0.144

Length

304 amino acids

Sequence
(BLAST)

001: MERYRMQSEE HIPCNVFLST GPVIFKPVEN QSSFKQIIII PEYFDYREIW AILSLVGTSH EEVELRVDFN TSLTLASDKR SMTIDDQSHL KKEAENSTNP
101: KINRYWIQRY DLFSRYDEGI QIDEEGWYSV THEEIAIKHA ERCRGKVVID CFAGVGGNTI QFAKVSSSVI AIDIDPMKVK MAMNNANVYG VANHVDFVVG
201: DFFSLAPSLK GDVSFLAPPW GGPNYCKVES FKMDMLQPRD GYSLFKIVQS ITPNIIMYLP KNVDLAQLEE LASLSSPPLT LEIEESCIGG KMIAITAYFS
301: RNAA

Best Arabidopsis Sequence Match ( AT1G30550.2 )
(BLAST)

001: MFQSYVTFLL SYISLVFLYS TEAESLIEKE HGTNPKISRY WIQRYDLFSK YDQGIEMDEE GWYSVTPEEI AIKQAERCRG KVVIDCFSGV GGNTIQFAKV
101: CSSVIAIDID PMKIALAMNN AKVYGVANRI DFVTGDFMQL APSLKGDVLF LSPPWGGPTY SKVESYKLDM LLPRDGYSLF QTALSITPNI IMFLPKNIDL
201: AQLEELACLS SPPLTLEIEE NSIGGEIKAI TAYFSSNVV

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:TAIR;Acc:AT1G30550]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.