Factsheet for VIT_09s0018g01550.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g104990.2.1	Tomato	cytosol	64.92	66.53
PGSC0003DMT400032794	Potato	cytosol, mitochondrion	64.52	65.31
AT1G30545.2	Thale cress	mitochondrion	58.87	62.66
Bra039862.1-P	Field mustard	cytosol	57.66	62.17
CDY47154	Canola	nucleus	57.26	61.74
CDY12465	Canola	cytosol	56.45	60.87
CDY05312	Canola	cytosol	47.18	59.39
CDX77588	Canola	cytosol	53.23	59.19
Bra026224.1-P	Field mustard	cytosol	52.82	58.74
AT1G30550.2	Thale cress	extracellular	55.24	57.32
TraesCS7A01G151900.1	Wheat	cytosol	42.34	55.26
GSMUA_Achr6P30880_001	Banana	cytosol, mitochondrion, nucleus, plastid	58.06	54.34
CDY02304	Canola	cytosol, mitochondrion, plasma membrane, plastid	33.87	50.6
Bra014884.1-P	Field mustard	cytosol	50.4	45.79
CDX98214	Canola	cytosol	52.82	43.09
OQU75980	Sorghum	mitochondrion	50.81	42.14
TraesCS7D01G153600.1	Wheat	mitochondrion, plastid	52.02	41.61
TraesCS7B01G055700.1	Wheat	cytosol, plastid	52.82	39.7
Zm00001d045079_P001	Maize	mitochondrion	50.4	37.09
CDY57504	Canola	nucleus, plastid	43.15	24.21
VIT_18s0001g10430.t01	Wine grape	cytosol	47.98	15.26

Protein Annotations

EntrezGene:100262065	wikigene:100262065	Gene3D:3.40.50.150	MapMan:35.2	ProteinID:CCB49713	ProteinID:CCB49713.1
UniProt:F6HBY0	EMBL:FN595513	GO:GO:0001510	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0009452	GO:GO:0009987	GO:GO:0016740	GO:GO:0036261	GO:GO:0071164
EntrezGene:LOC100262065	wikigene:LOC100262065	PFAM:PF09445	PANTHER:PTHR14741	InterPro:RNA_cap_Gua-N2-MeTrfase	InterPro:SAM-dependent_MTases
SUPFAM:SSF53335	TIGR:TC53809	UniParc:UPI00015CAAC7	ArrayExpress:VIT_09s0018g01550	EnsemblPlantsGene:VIT_09s0018g01550	EnsemblPlants:VIT_09s0018g01550.t01
unigene:Vvi.15229	unigene:Vvi.23203	RefSeq:XP_002271770	RefSeq:XP_002271770.1	SEG:seg	:

Description

No Description!

Coordinates

chr9:+:18710215..18716021

Molecular Weight (calculated)

28096.8 Da

IEP (calculated)

9.245

GRAVY (calculated)

-0.363

Length

248 amino acids

Sequence
(BLAST)

001: MESELSNKPT RRRSKKRKLS KRRLKIKGRK RTTEKGISPL VEKYWRQRYN LFSSYDDGIK MDEEGWFSVT PEEIAIRHAE RSGGGCVIDC FSGVGGNTIQ
101: FAKMCHHVVA IDLDPHKVEL AFNNAKIYGV EDYIDFIIGD FFQLASSLKG DVAFLAPPWG GPSYKTIPNF SLDLLKPKDG YSIFQAAQAI TPNIIMFLPR
201: NVDLRQVEEL SWLSSPPLNI EIEENYVQNH LKGITAYFGG TAFGKLNL

Best Arabidopsis Sequence Match ( AT1G30545.2 )
(BLAST)

001: MTRSMKLKKR SRLKKEVKST IEKDNGRRHK ITKYWIQRYD LFSRYDQGIE MDEEGWYSVT PEEIAIKQAQ RYRGKVVIDC FSGVGGNTIQ FAKVCSSVVA
101: IDIDPVKVEL AMNNAMVYGV ANRVDFVIGD FIQLAPSLKG DVVFLSPPWG GPMYRDFESY NLDMLQPRDG YSLFQIAQSI TPNIIMFLPR NVDLAQVEEL
201: AWLSSPPLNL EIEENFVGGR MKAVTAYFSC NAV

Arabidopsis Description

S-adenosyl-L-methionine-dependent methyltransferase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8ASE3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.